Evidence map›Paper›PMID 41428735›Full record

ArticleNucleic acids research2025

DNA extrusion size determines pathway choice during CAG repeat expansion.

Mayuri Bhatia, Ashutosh S Phadte, Anna Lakhina, Anthony R Monte Carlo Iii, Sarah Barndt, Anna Pluciennik

Erratum issuedAbstract read
In one paragraph

Article in Nucleic acids research, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
  2. Review
  3. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

6 authors.

Mayuri BhatiaDepartment of Biochemistry and Molecular Biology, Sidney Kimmel Medical College, Thomas Jefferson University, Philadelphia, PA 19107, United States.
Ashutosh S PhadteDepartment of Biochemistry and Molecular Biology, Sidney Kimmel Medical College, Thomas Jefferson University, Philadelphia, PA 19107, United States.
Anna LakhinaDepartment of Biochemistry and Molecular Biology, Sidney Kimmel Medical College, Thomas Jefferson University, Philadelphia, PA 19107, United States.
Anthony R Monte Carlo IiiDepartment of Biochemistry and Molecular Biology, Sidney Kimmel Medical College, Thomas Jefferson University, Philadelphia, PA 19107, United States.
Sarah BarndtDepartment of Biochemistry and Molecular Biology, Sidney Kimmel Medical College, Thomas Jefferson University, Philadelphia, PA 19107, United States.
Anna PluciennikDepartment of Biochemistry and Molecular Biology, Sidney Kimmel Medical College, Thomas Jefferson University, Philadelphia, PA 19107, United States.ORCID 0000-0003-4868-6024

Funding

Molecular mechanisms of triplet repeat instability in Huntington's diseaseR01NS118082 · NINDS · THOMAS JEFFERSON UNIVERSITY · PI PLUCIENNIK, ANNA · 2021 to 2025
$1.9M
Crosstalk between DNA repair pathways in repeat instabilityR01GM144553 · NIGMS · THOMAS JEFFERSON UNIVERSITY · PI Anna Pluciennik · 2023 to 2026
$1.4M
NIGMS NIH HHS R01 GM144553NIGMS NIH HHS R01 NS118082NINDS NIH HHS R01 NS118082Thomas Jefferson University Open Access Fund and Thomas Jefferson University Sidney Kimmel Medical College
6 · The paper itself

Abstract

DNA triplet repeat expansion causes several primarly neurological disorders like Huntington's disease, myotonic dystrophy type 1, and fragile-X related disorders. There is general consensus that recognition of extrahelical extrusions or hairpin-loop structures (formed by strand slippage) by the DNA mismatch repair protein MutSβ leads to repeat expansion by a mutagenic process. By contrast, the FAN1 nuclease attenuates triplet repeat expansion, the molecular basis of which was explained by our recent finding that FAN1 nuclease cleaves and initiates removal of extrahelical extrusions. Here we show that extrusions containing two or more triplet repeats are subject to recognition and processing by either FAN1 or MutSβ. However, extrusions containing a single triplet escape FAN1 cleavage and are preferentially processed by a MutSβ-dependent process, leading to repeat expansion. Thus, extrahelical extrusion size determines the ultimate fate of the repeat element, the protective role of FAN1 being limited to removal of extrusions containing two or more triplets. Therefore, repeat expansion is a net consequence of MutSβ-dependent processing of single triplet extrusions and competition between MutSβ and FAN1 for extrusions containing two or more triplets. These findings provide new insights into the role of DNA structural dynamics in determining pathway choice in DNArepair.

Indexed as

DNAExodeoxyribonucleasesTrinucleotide Repeat ExpansionEndodeoxyribonucleasesHumansMultifunctional EnzymesMutS Homolog 3 ProteinNucleic Acid ConformationDNAEndodeoxyribonucleasesExodeoxyribonucleasesFAN1 protein, humanMSH3 protein, humanMultifunctional EnzymesMutS Homolog 3 Protein

Identifiers

PMID41428735
PMCPMC12721328

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.