Evidence map›Paper›PMID 41428085›Full record

ArticleCurrent microbiology2025

Psychrotolerant Erwinia psychrophila sp. nov. and Erwinia magellanica sp. nov. Isolated from Penguin Faeces.

Ivo Sedláček, Pavla Holochová, Karel Sedlář, Eva Staňková, Mohammad Umair, Ondrej Šedo, Jitka Vives, Vendula Koublová, Dana Nováková, Pavel Švec

Abstract read
In one paragraph

Article in Current microbiology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Ivo SedláčekDepartment of Experimental Biology, Faculty of Science, Czech Collection of Microorganisms, Masaryk University, Kamenice 5, Brno, 625 00, Czech Republic. ivo@sci.muni.cz.ORCID http://orcid.org/0000-0003-1717-187X
Pavla HolochováFaculty of Science, RECETOX, Masaryk University, Kamenice 5, Brno, 625 00, Czech Republic.
Karel SedlářDepartment of Biomedical Engineering, Faculty of Electrical Engineering and Communication, Brno University of Technology, Technická 12, Brno, 616 00, Czech Republic.
Eva StaňkováDepartment of Experimental Biology, Faculty of Science, Czech Collection of Microorganisms, Masaryk University, Kamenice 5, Brno, 625 00, Czech Republic.
Mohammad UmairDepartment of Biomedical Engineering, Faculty of Electrical Engineering and Communication, Brno University of Technology, Technická 12, Brno, 616 00, Czech Republic.
Ondrej ŠedoCentral European Institute of Technology, Masaryk University, Kamenice 5, Brno, 625 00, Czech Republic.
Jitka VivesDepartment of Experimental Biology, Faculty of Science, Czech Collection of Microorganisms, Masaryk University, Kamenice 5, Brno, 625 00, Czech Republic.
Vendula KoublováDepartment of Experimental Biology, Faculty of Science, Czech Collection of Microorganisms, Masaryk University, Kamenice 5, Brno, 625 00, Czech Republic.
Dana NovákováDepartment of Experimental Biology, Faculty of Science, Czech Collection of Microorganisms, Masaryk University, Kamenice 5, Brno, 625 00, Czech Republic.
Pavel ŠvecDepartment of Experimental Biology, Faculty of Science, Czech Collection of Microorganisms, Masaryk University, Kamenice 5, Brno, 625 00, Czech Republic.ORCID http://orcid.org/0000-0002-1051-5177

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Our taxonomic study was aimed at characterizing enteric bacteria isolated from faecal samples of Magellanic penguins (Spheniscus magellanicus) collected in Cabo Virgenes, Patagonia, Argentina, in 2016 and 2017. Initial sequencing of the 16S rRNA gene assigned two psychrotolerant strains, P6884T and P7711T, to the genus Erwinia. The closest phylogenetic relatives of the strains were Erwinia billingiae and Erwinia endophytica type strains, with 16S rRNA gene sequence similarity values between 98.4% and 98.9%. Whole-genome sequence analysis revealed that the strains analyzed could not be assigned to any validly named Erwinia species based on ANI and dDDH similarity values. Moreover, the ANI and dDDH similarities between the strains P6884T and P7711T genomes analyzed were 79.4% and 22.6%, respectively, indicating that they are distinct taxa. Further analysis using phenotyping and chemotaxonomy showed that the strains represent two newly discovered species of the genus Erwinia. The type strains P6884T (= CCM 9357T = LMG 33570T) representing Erwinia psychrophila sp. nov., and P7711T (= CCM 9358T = LMG 33569T) representing Erwinia magellanica sp. nov., were deposited in the Czech Collection of Microorganisms and BCCM/LMG Bacteria Collection. Erwinia species are typically associated with plants, fruits, and vegetables, and some species are important phytopathogens responsible for diseases in several economically important crops. The isolation of Erwinia species from penguin droppings shows that the microflora of penguin droppings, which can alter soil geochemistry in rookeries, may indicate yet unknown interactions within the Patagonian environment.

Indexed as

ErwiniaFecesSpheniscidaeAnimalsArgentinaBacterial Typing TechniquesDNA, BacterialGenome, BacterialPhylogenyRNA, Ribosomal, 16SSequence Analysis, DNADNA, BacterialRNA, Ribosomal, 16SDescriptionErwiniaMagellanic penguinPsychrotolerantTaxonomy

Identifiers

PMID41428085
PMCPMC12722478

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.