Evidence map›Paper›PMID 41426954›Full record

ArticlemicroPublication biology2025

AgBioDatabase Finder: an online tool to help researchers find and submit agricultural genomic, genetic, and breeding data.

Leyla Cabugos, Katheryn Buble, Jenna Daenzer, Sook Jung, Dorrie Main, Annarita Marrano, David Molik, Daniela Raciti, Adam Wright, Karen Yook and 1 more

Abstract read
PubMed Full text at PMC Publisher
In one paragraph

Article in microPublication biology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. The future is FAIR: a community framework for enhanced data management and data sharing.Database : the journal of biological databases and curation · 2026
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Leyla CabugosRobert E. Kennedy Library, California Polytechnic State University, San Luis Obispo, California, United States.
Katheryn BubleDepartment of Horticulture, Washington State University, Pullman, Washington, United States.
Jenna DaenzerGenetics Society of America, Rockville, Maryland, United States.
Sook JungDepartment of Horticulture, Washington State University, Pullman, Washington, United States.
Dorrie MainDepartment of Horticulture, Washington State University, Pullman, Washington, United States.
Annarita MarranoPhoenix Bioinformatics, Newark, California, United States.
David MolikCenter for Scholarly Publishing, Kansas State Libraries, Kansas State University, Manhattan, Kansas, United States.
Daniela RacitiDivision of Biology and Biological Engineering, California Institute of Technology, Pasadena, California, United States.
Adam WrightAdaptive Oncology Department, Ontario Institute for Cancer Research, Toronto, Ontario, Canada.
Karen YookDivision of Biology and Biological Engineering, California Institute of Technology, Pasadena, California, United States.
Leonore ReiserPhoenix Bioinformatics, Newark, California, United States.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

To improve the FAIRness of agricultural genomic, genetic, and breeding ( GGB ) data, the AgBioData FAIR Scientific Literature Working Group developed a free search tool that helps researchers identify appropriate databases for submitting their data. Existing repository discovery tools lack the specificity needed for GGB data. Our tool filters databases by organism and data type, mapped using established ontologies, and provides database profiles linking directly to submission guidelines. By guiding authors toward suitable, domain-specific databases, this resource facilitates improved data curation, discoverability, and reuse in agricultural research. The tool can be accessed at https://www.agbiodata.org/databasefinder.

Identifiers

PMID41426954
PMCPMC12714338

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.