Evidence map›Paper›PMID 41424725›Full record

ArticlePeerJ2025

Bioinformatics-based identification and validation of mitochondria-related genes associated with neonatal sepsis.

Yu Zhong, Guilin Zhao, Shanshan Pu, Yushan Zhang, Dongju Pan, Xu Yang, Tingting Fu, Lu Chen, Chaofen Li, Xueyu Li and 6 more

Abstract read
In one paragraph

Article in PeerJ, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

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0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

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PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors.

Yu Zhong *Department of Neonatology, Puer People's Hospital, Pu'er, China.
Guilin Zhao *Department of Neonatology, Puer People's Hospital, Pu'er, China.
Shanshan PuDepartment of Neonatology, Puer People's Hospital, Pu'er, China.
Yushan ZhangDepartment of Neonatology, Puer People's Hospital, Pu'er, China.
Dongju PanDepartment of Neonatology, Puer People's Hospital, Pu'er, China.
Xu YangDepartment of Neonatology, Puer People's Hospital, Pu'er, China.
Tingting FuDepartment of Neonatology, Puer People's Hospital, Pu'er, China.
Lu ChenDepartment of Neonatology, Puer People's Hospital, Pu'er, China.
Chaofen LiDepartment of Neonatology, Puer People's Hospital, Pu'er, China.
Xueyu LiDepartment of Neonatology, Puer People's Hospital, Pu'er, China.
Zhi LiDepartment of Neonatology, Puer People's Hospital, Pu'er, China.
Jun WuDepartment of Neonatology, Puer People's Hospital, Pu'er, China.
Shanping ChenDepartment of Neonatology, Puer People's Hospital, Pu'er, China.
Zupeng QiuDepartment of Neonatology, Puer People's Hospital, Pu'er, China.
Ying ZhangDepartment of Neonatology, Puer People's Hospital, Pu'er, China.
Fan LiDepartment of Neonatology, Puer People's Hospital, Pu'er, China.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Background: While mitochondrial involvement in sepsis has been widely studied, its role in neonatal sepsis (NESE) remains unclear. This study aimed to explore the molecular mechanisms of mitochondrial-related genes (MRGs) in NESE using bioinformatics analysis. Methods: This study utilized neonatal sepsis-related datasets GSE69686 and GSE95233. Differentially expressed genes (DEGs) were identified by comparing NESE and control groups. Subsequently, candidate genes were then selected by intersecting DEGs with MRGs. These candidate genes were further refined using least absolute shrinkage and selection operator (LASSO) regression and the Boruta algorithm to identify potential biomarkers. Expression levels and receiver operating characteristic (ROC) curve analyses of the candidate biomarkers were assessed in both datasets. To further investigate their mechanisms, functional enrichment, immune infiltration, and drug prediction analyses were conducted. Finally, biomarker expression was validated using reverse transcription-quantitative polymerase chain reaction (RT-qPCR). Results: A total of 24 candidate genes were obtained by overlapping 579 DEGs and 1,136 MRGs. Conclusions: In this study, six mitochondria-related biomarkers in NESE were identified and preliminarily validated, which may provide novel insights into disease mechanisms and serve as a potential basis for future diagnostic and therapeutic exploration.

Indexed as

Computational BiologyMitochondriaNeonatal SepsisBiomarkersDatabases, GeneticGene Expression ProfilingHumansInfant, NewbornROC CurveBiomarkersBiomarkersImmune infiltrationMitochondrialNeonatal sepsis

Identifiers

PMID41424725
PMCPMC12717851

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.