Evidence map›Paper›PMID 41422102›Full record

ArticleNature communications2025

A Plug-in system for reprogramming the editing patterns of base editors.

Chaoyue Zhong, Lan Yu, Tingting Zhao, Xue Shen, Zhen Li, Wei Zhu, Zheng Hu, Rui Tian, Zhiqiang Han, Dan He

Abstract read
In one paragraph

Article in Nature communications, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Embedded CRISPRi Enhances Gene-Silencing Efficiency in Drosophila.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2026
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Chaoyue Zhong *Taikang Center for Life and Medical Sciences, Wuhan University, Wuhan, Hubei, China.
Lan Yu *Department of Gynecology and Obstetrics, Guangzhou Women and Children's Medical Center, Guangzhou Medical University, Guangzhou, Guangdong, China.
Tingting Zhao *Generulor Co., Ltd., Zhuhai, Guangdong, China.ORCID http://orcid.org/0009-0002-3539-4612
Xue Shen *Department of Gynecology and Obstetrics, Xiangyang No. 1 People's Hospital, Hubei University of Medicine, Xiangyang, Hubei, China.
Zhen Li *Department of Gynecologic Oncology, Women and Children's Hospital Affiliated to Zhongnan Hospital of Wuhan University, Wuhan, Hubei, China.
Wei ZhuGenerulor Co., Ltd., Zhuhai, Guangdong, China.ORCID http://orcid.org/0000-0003-1459-6733
Zheng HuTaikang Center for Life and Medical Sciences, Wuhan University, Wuhan, Hubei, China. huzheng1998@163.com.ORCID http://orcid.org/0000-0001-9306-9442
Rui TianGenerulor Co., Ltd., Zhuhai, Guangdong, China. tianruiaiya@gmail.com.ORCID http://orcid.org/0000-0002-2305-6395
Zhiqiang HanDepartment of Obstetrics and Gynecology, Tongji Hospital, Tongji Medical College, Huazhong University of Science and Technology, Wuhan, Hubei, China. hanzq2003@126.com.
Dan HeDepartment of Neurology, Zhongnan Hospital of Wuhan University, Wuhan, Hubei, China. hedan4103@163.com.

Funding

China Postdoctoral Science Foundation 2023M734090China Postdoctoral Science Foundation 2023M734091China Postdoctoral Science Foundation 2023M744121National Natural Science Foundation of China (National Science Foundation of China) 32171465National Natural Science Foundation of China (National Science Foundation of China) 32500460
6 · The paper itself

Abstract

DNA base editors are transformative genome editing tools that enable nucleotide conversions without inducing double-stranded DNA breaks, making them promising for correcting genetic mutations. Current base editors, however, are limited by fixed editing windows and constrained location of deaminases. To address these constraints, we develop a modular system termed Plug-in Base Editor (Plug-in BE), which dynamically programs deaminase positioning via integrating various epitopes and antibody-fused deaminases. This system expands the editing capabilities of base editors by optimizing deaminase's spatial interaction with DNA, leading to improvements in efficiencies, window restrictions, and safety profiles. We validate Plug-in BE's versatility and high fidelity in cancer gene therapy and zebrafish embryo editing, demonstrating its potential as a powerful and adaptable tool for basic research and therapeutic applications. This innovation can generate a series of base editors without extensive protein evolution, positioning Plug-in BE as a significant advancement in the field of genome editing.

Indexed as

Gene EditingAnimalsCRISPR-Cas SystemsDNAGenetic TherapyHEK293 CellsHumansZebrafishDNA

Identifiers

PMID41422102
PMCPMC12830782

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.