Evidence map›Paper›PMID 41416182›Full record

ArticlePlant phenomics (Washington, D.C.)2025

Global rice multiclass segmentation dataset (RiceSEG): comprehensive and diverse high-resolution RGB-annotated images for the development and benchmarking of rice segmentation algorithms.

Junchi Zhou, Haozhou Wang, Yoichiro Kato, Tejasri Nampally, P Rajalakshmi, M Balram, Keisuke Katsura, Hao Lu, Yue Mu, Wanneng Yang and 14 more

Abstract read
In one paragraph

Article in Plant phenomics (Washington, D.C.), 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

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3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

24 authors.

Junchi ZhouEngineering Research Center of Plant Phenotyping, Ministry of Education, Jiangsu Collaborative Innovation Center for Modern Crop Production, Sanya Institute of Nanjing Agricultural University, Academy for Advanced Interdisciplinary Studies, Nanjing Agricultural University, Nanjing, China.
Haozhou WangGraduate School of Agricultural and Life Sciences, The University of Tokyo, Tokyo, Japan.
Yoichiro KatoGraduate School of Agricultural and Life Sciences, The University of Tokyo, Tokyo, Japan.
Tejasri NampallyDepartment of Artificial Intelligence, Indian Institute of Technology, Hyderabad, India.
P RajalakshmiDepartment of Electrical Engineering, Indian Institute of Technology, Hyderabad, India.
M BalramInstitute of Biotechnology, Professor Jayashankar Telangana Agricultural State University, Hyderabad, India.
Keisuke KatsuraGraduate School of Agriculture, Kyoto University, Kyoto, Japan.
Hao LuKey Laboratory of Image Processing and Intelligent Control, School of Artificial Intelligence and Automation, Huazhong University of Science and Technology, Wuhan, China.
Yue MuEngineering Research Center of Plant Phenotyping, Ministry of Education, Jiangsu Collaborative Innovation Center for Modern Crop Production, Sanya Institute of Nanjing Agricultural University, Academy for Advanced Interdisciplinary Studies, Nanjing Agricultural University, Nanjing, China.
Wanneng YangNational Key Laboratory of Crop Genetic Improvement, National Center of Plant Gene Research, and Hubei Key Laboratory of Agricultural Bioinformatics, Huazhong Agricultural University, Wuhan, China.
Yangmingrui GaoEngineering Research Center of Plant Phenotyping, Ministry of Education, Jiangsu Collaborative Innovation Center for Modern Crop Production, Sanya Institute of Nanjing Agricultural University, Academy for Advanced Interdisciplinary Studies, Nanjing Agricultural University, Nanjing, China.
Feng XiaoEngineering Research Center of Plant Phenotyping, Ministry of Education, Jiangsu Collaborative Innovation Center for Modern Crop Production, Sanya Institute of Nanjing Agricultural University, Academy for Advanced Interdisciplinary Studies, Nanjing Agricultural University, Nanjing, China.
Hongtao ChenEngineering Research Center of Plant Phenotyping, Ministry of Education, Jiangsu Collaborative Innovation Center for Modern Crop Production, Sanya Institute of Nanjing Agricultural University, Academy for Advanced Interdisciplinary Studies, Nanjing Agricultural University, Nanjing, China.
Yuhao ChenEngineering Research Center of Plant Phenotyping, Ministry of Education, Jiangsu Collaborative Innovation Center for Modern Crop Production, Sanya Institute of Nanjing Agricultural University, Academy for Advanced Interdisciplinary Studies, Nanjing Agricultural University, Nanjing, China.
Wenjuan LiState Key Laboratory of Efficient Utilization of Arid and Semiarid Arable Land in Northern China, The Institute of Agricultural Resources and Regional Planning, Chinese Academy of Agricultural Sciences, Beijing, China.
Jingwen WangCenter for Geospatial Information, Shenzhen Institutes of Advanced Technology, Chinese Academy of Science, Shenzhen, China.
Fenghua YuSchool of Information and Electrical Engineering, Shenyang Agricultural University, Shenyang, China.
Jian ZhouRice Research Institute, Jilin Academy of Agricultural Sciences, Changchun, China.
Wensheng WangInstitute of Crop Sciences/National Key Facility for Crop Gene Resources and Genetic Improvement, Chinese Academy of Agricultural Sciences, Beijing, China.
Xiaochun HuYuan Long Ping High-Tech Agriculture Co., Ltd., Changsha, China.
Yuanzhu YangYuan Long Ping High-Tech Agriculture Co., Ltd., Changsha, China.
Yanfeng DingEngineering Research Center of Plant Phenotyping, Ministry of Education, Jiangsu Collaborative Innovation Center for Modern Crop Production, Sanya Institute of Nanjing Agricultural University, Academy for Advanced Interdisciplinary Studies, Nanjing Agricultural University, Nanjing, China.
Wei GuoGraduate School of Agricultural and Life Sciences, The University of Tokyo, Tokyo, Japan.
Shouyang LiuEngineering Research Center of Plant Phenotyping, Ministry of Education, Jiangsu Collaborative Innovation Center for Modern Crop Production, Sanya Institute of Nanjing Agricultural University, Academy for Advanced Interdisciplinary Studies, Nanjing Agricultural University, Nanjing, China.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The development of computer vision-based rice phenotyping techniques is crucial for precision field management and accelerated breeding, which facilitate continuously advancing rice production. Among phenotyping tasks, distinguishing image components is a key prerequisite for characterizing plant growth and development at the organ scale, enabling deeper insights into ecophysiological processes. However, owing to the fine structure of rice organs and complex illumination within the canopy, this task remains highly challenging, underscoring the need for a high-quality training dataset. Such datasets are scarce, both because of a lack of large, representative collections of rice field images and because of the time-intensive nature of the annotation. To address this gap, we created the first comprehensive multiclass rice semantic segmentation dataset, RiceSEG. We gathered nearly 50,000 high-resolution, ground-based images from five major rice-growing countries (China, Japan, India, the Philippines, and Tanzania), encompassing more than 6000 genotypes across all growth stages. From these original images, 3078 representative samples were selected and annotated with six classes (background, green vegetation, senescent vegetation, panicle, weeds, and duckweed) to form the RiceSEG dataset. Notably, the subdataset from China spans all major genotypes and rice-growing environments from northeastern to southern regions. Both state-of-the-art convolutional neural networks and transformer-based semantic segmentation models were used as baselines. While these models perform reasonably well in segmenting background and green vegetation, they face difficulties during the reproductive stage, when canopy structures are more complex and when multiple classes are involved. These findings highlight the importance of our dataset for developing specialized segmentation models for rice and other crops. The RiceSEG dataset is publicly available at www.global-rice.com.

Indexed as

Crop monitoringDeep learningRice phenotypingRiceSEG datasetSemantic segmentation

Identifiers

PMID41416182
PMCPMC12710049

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.