Evidence map›Paper›PMID 41413058›Full record

ArticleNature communications2025

Structural insights into C3 convertase activity of the classical pathway of complement.

Karla I De la O Becerra, T Harma C Brondijk, Itziar Serna Martin, Piet Gros

Abstract read
In one paragraph

Article in Nature communications, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Karla I De la O BecerraStructural Biochemistry, Bijvoet Centre for Biomolecular Research, Dept. of Chemistry, Faculty of Science, Utrecht University, Utrecht, The Netherlands.ORCID http://orcid.org/0000-0001-7965-0572
T Harma C BrondijkStructural Biochemistry, Bijvoet Centre for Biomolecular Research, Dept. of Chemistry, Faculty of Science, Utrecht University, Utrecht, The Netherlands.ORCID http://orcid.org/0000-0002-0234-673X
Itziar Serna MartinStructural Biochemistry, Bijvoet Centre for Biomolecular Research, Dept. of Chemistry, Faculty of Science, Utrecht University, Utrecht, The Netherlands.
Piet GrosStructural Biochemistry, Bijvoet Centre for Biomolecular Research, Dept. of Chemistry, Faculty of Science, Utrecht University, Utrecht, The Netherlands. p.gros@uu.nl.ORCID http://orcid.org/0000-0002-7782-2585

Funding

Consejo Nacional de Ciencia y Tecnología (National Council of Science and Technology, Mexico) CVU 604718EC | EU Framework Programme for Research and Innovation H2020 | H2020 Priority Excellent Science | H2020 European Research Council (H2020 Excellent Science - European Research Council) 787241Nederlandse Organisatie voor Wetenschappelijk Onderzoek (Netherlands Organisation for Scientific Research) 01.80.104.00
6 · The paper itself

Abstract

Immune protection by the complement system depends on C3 cleavage by C3 convertases that is critical to all three activation pathways. Structural data on convertase formation in the classical pathway and on C3-substrate binding to convertases is lacking. We present the cryo-EM structures of the proconvertase (C4b2), convertase (C4b2b), and convertase-substrate complex (C4b2b-C3) of the classical pathway. The data show that C2 and C4b form proconvertases and convertases like factor B and C3b of the alternative pathway. Substrate C3 binds C4b of the convertase through two interfaces: one also found in the SCIN-inhibited C3bBb dimer, and another facilitated by conformational changes in C3. Bending of C3 and swinging of the C2 protease bring the C3-scissile loop into the active site. The second, charged, C4b-interaction site favors C3- substrate binding, but upon cleavage repels product C3b. Thus, a charge switch-over mechanism effects the catalytic turnover of the convertases producing opsonin C3b.

Indexed as

Complement C3-C5 ConvertasesComplement Pathway, ClassicalCatalytic DomainComplement C2Complement C3Complement C3bComplement C4bCryoelectron MicroscopyHumansModels, MolecularProtein BindingProtein ConformationComplement C2Complement C3Complement C3bComplement C3-C5 ConvertasesComplement C4b

Identifiers

PMID41413058
PMCPMC12847986

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.