Evidence map›Paper›PMID 41410481›Full record

ArticleBiostatistics (Oxford, England)2025

Multi-study R-learner for estimating heterogeneous treatment effects across studies using statistical machine learning.

Cathy Shyr, Boyu Ren, Prasad Patil, Giovanni Parmigiani

Abstract read
In one paragraph

Article in Biostatistics (Oxford, England), 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Cathy ShyrDepartment of Biomedical Informatics, Vanderbilt University Medical Center, 2525 West End Avenue, Nashville, TN 37203, United States.ORCID 0000-0001-7466-0034
Boyu RenLaboratory for Psychiatric Biostatistics, McLean Hospital, 115 Mills Street, Belmont, MA 02478, United States.
Prasad PatilDepartment of Biostatistics, Boston University School of Public Health, 715 Albany Street, Boston, MA 02115, United States.
Giovanni ParmigianiDepartment of Data Science, Dana-Farber Cancer Institute, 450 Brookline Avenue, Boston, MA 02215, United States.ORCID 0000-0002-8783-5961

Funding

Training Grant in Quantitative Sciences for Cancer ResearchT32CA009337 · NCI · HARVARD UNIVERSITY (SCH OF PUBLIC HLTH) · PI QUACKENBUSH, JOHN, TRIPPA, LORENZO · 1986 to 2025
$12.3M
Development and implementation of statistical machine learning methods to shorten rare disease odysseysR00LM014429 · NLM · VANDERBILT UNIVERSITY MEDICAL CENTER · PI Cathy Shyr · 2025 to 2026
$493k
National Science Foundation NSF-DMS 2113707NCI NIH HHS 5T32CA009337-40NCI NIH HHS T32 CA009337NLM NIH HHS R00 LM014429U.S. National Institutes of Health National Library of Medicine R00LM014429
6 · The paper itself

Abstract

Heterogeneous treatment effect (HTE) refers to the nonrandom, explainable variation in treatment effects for individuals in a population. HTE estimation is central to precision medicine, where accurate effect estimates can inform personalized treatment decisions. In practice, patients can present with covariate profiles that overlap with multiple studies, raising the challenge of optimally informing treatment decisions in a multi-study setting. We proposed a flexible statistical machine learning (ML) framework, the multi-study $ R $-learner, that leverages multiple studies to estimate the HTE. Existing multi-study approaches often assume that study-specific (i) conditional average treatment effect (CATE), (ii) expected potential outcome under no treatment given covariates, and (iii) treatment assignment mechanism are identical across studies, but these assumptions may not hold in practice due to differences in study populations, protocols, or designs. To this end, we developed our framework to directly account for these three types of between-study heterogeneity. It builds upon recent advances in cross-study learning and uses a data-adaptive objective function to combine cross-study estimates of nuisance functions with study-specific CATEs via membership probabilities, which enable information to be borrowed across studies. The multi-study $ R $-learner extends the $ R $-learner to the multi-study setting and is flexible in its ability to incorporate ML techniques. In the series estimation framework, we showed that the proposed method is asymptotically normal and more efficient than the $ R $-learner when there is between-study heterogeneity in the treatment assignment mechanisms. We illustrated using cancer data from randomized controlled trials and observational studies that the multi-study $ R $-learner performs favorably in the presence of between-study heterogeneity.

Indexed as

Machine LearningModels, StatisticalPrecision MedicineBiostatisticsData Interpretation, StatisticalHumansTreatment Effect HeterogeneityTreatment Outcomebetween-study heterogeneitycausal inferenceconditional average treatment effectmachine learningprecision medicine

Identifiers

PMID41410481
PMCPMC12713001

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.