Evidence map›Paper›PMID 41409679›Full record

ArticlemedRxiv : the preprint server for health sciences2025

Fully Automated Deep Learning-Based Pipeline for Evans Index Measurement from Raw 3D MRI.

Siavash Shirzadeh Barough, Murat Bilgel, Ameya Moghekar, Catalina Ventura, Mark G Luciano, Abhay Moghekar

Abstract readPreprint
In one paragraph

Article in medRxiv : the preprint server for health sciences, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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0citing papers in PubMed
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1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

6 authors.

Siavash Shirzadeh BaroughDepartment of Neurology, Johns Hopkins University School of Medicine, Baltimore, MD, USA.
Murat BilgelLaboratory of Behavioral Neuroscience, National Institute on Aging, NIH, Baltimore, MD 21224, USA.ORCID 0000-0001-5042-7422
Ameya MoghekarDepartment of Neurology, Johns Hopkins University School of Medicine, Baltimore, MD, USA.
Catalina VenturaDepartment of Neurology, Johns Hopkins University School of Medicine, Baltimore, MD, USA.
Mark G LucianoDepartment of Neurosurgery, Johns Hopkins University School of Medicine, Baltimore, MD, USA.
Abhay MoghekarDepartment of Neurology, Johns Hopkins University School of Medicine, Baltimore, MD, USA.ORCID 0000-0001-9464-1551

Funding

Project 2 MeasurementU19AG033655 · NIA · JOHNS HOPKINS UNIVERSITY · PI Abhay Moghekar · 2014 to 2026
$51.5M
Research Education ComponentP30AG066507 · NIA · JOHNS HOPKINS UNIVERSITY · PI Corinne Pettigrew · 2020 to 2026
$29.3M
NIA NIH HHS P30 AG066507NIA NIH HHS U19 AG033655
6 · The paper itself

Abstract

Ventriculomegaly is a key neuroimaging feature in conditions such as normal pressure hydrocephalus (NPH) and other disorders of cerebrospinal fluid (CSF) dynamics. The Evans Index (EI), defined as the ratio of the maximal frontal horn width to the maximal inner skull diameter, remains a simple and widely used marker for ventricular enlargement. However, manual EI measurement is subject to observer variability and dependent on proper alignment to the anterior commissure-posterior commissure (AC-PC) plane, limiting reproducibility in large-scale and multi-center studies. We present a fully automated deep learning-based pipeline for EI calculation directly from raw T1-weighted MPRAGE MRI scans. The pipeline integrates (i) landmark detection using the BrainSignsNet model, (ii) rigid AC-PC alignment, and (iii) robust segmentation of the lateral ventricles (LV) and intracranial volume (ICV) via nnU-Net models, including a custom ventricular network trained on 1,300 annotated scans enriched for hydrocephalus. The Evans Index is then derived from automated measurement of frontal horn width and inner skull diameter at the aligned axial slice. Internal validation using data from the Baltimore Longitudinal Study of Aging, BIOCARD, and Johns Hopkins cohorts demonstrated high segmentation accuracy (Dice coefficient = 0.98). External validation on the PENS trial, including pre- and post-shunt NPH scans, showed excellent agreement with expert manual EI measurements (mean bias = 0.0068, mean absolute error = 0.0103, r = 0.96, p < 0.001). Bias analyses revealed no significant association between measurement error and age, sex, or ventricular volume This fully automated, orientation-standardized method achieves accurate and reproducible Evans Index measurement across diverse MRI datasets. By eliminating manual intervention, the pipeline enhances scalability for large neuroimaging cohorts and provides a reliable tool for clinical assessment, screening and monitoring of ventriculomegaly, especially in NPH.

Identifiers

PMID41409679
PMCPMC12706619

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.