Evidence map›Paper›PMID 41408166›Full record

ArticleVirulence2026

Molecular characterization and pathogenicity of a novel Chinese porcine deltacoronavirus strain CH/HLJ/20 isolated from diarrheic piglets.

Yanan Wang, Xinyi Ma, Hui Zhang, Xihuai Xue, Jiaxuan Li, Yanping Jiang, Wen Cui, Dandan Liu, Bin Zhou, Li Wang

Abstract read
In one paragraph

Article in Virulence, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Yanan WangCollege of Veterinary Medicine, Northeast Agricultural University, Harbin, China.
Xinyi MaCollege of Veterinary Medicine, Northeast Agricultural University, Harbin, China.
Hui ZhangCollege of Veterinary Medicine, Northeast Agricultural University, Harbin, China.
Xihuai XueDepartment of Cell and Systems Biology, University of Toronto, Toronto, ON, Canada.
Jiaxuan LiCollege of Veterinary Medicine, Northeast Agricultural University, Harbin, China.
Yanping JiangCollege of Veterinary Medicine, Northeast Agricultural University, Harbin, China.
Wen CuiCollege of Veterinary Medicine, Northeast Agricultural University, Harbin, China.
Dandan LiuThe Eighth Affiliated Hospital, Sun YAT-SEN University, Shenzhen, China.
Bin ZhouCollege of Veterinary Medicine, Northeast Agricultural University, Harbin, China.
Li WangCollege of Veterinary Medicine, Northeast Agricultural University, Harbin, China.ORCID 0000-0002-8682-0696

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Porcine deltacoronavirus (PDCoV) is an emerging enteric coronavirus that causes acute diarrhea and high mortality in neonatal piglets. In this study, we isolated and characterized a novel PDCoV strain, CH/HLJ/20, from diarrheic piglets in Northeast China. Full-length genome sequencing and phylogenetic analysis revealed that CH/HLJ/20 belongs to the Chinese lineage but harbors distinct recombination signals within the S gene, with Korea/DH1/2017 and CHN/Tianjin/2016 identified as putative parental strains. Comparative analysis identified two unique amino acid substitutions (Q10H and N98K) within the receptor-binding domain (RBD) of the spike protein. Structural modeling and molecular docking revealed that the CH/HLJ/20 RBD retains binding compatibility with aminopeptidase N (APN) receptors from multiple species, including pig, human, dog, cat, and chicken, indicating broad host receptor adaptability. Docking simulations using sequence-reverted mutants suggested that these substitutions may slightly attenuate receptor-binding affinity, potentially influencing cross-species transmission. Notably, the N98K residue has been identified as a critical site involved in both APN binding and neutralizing epitopes, therefore, its mutation may influence receptor engagement and antigenic properties. In vivo virus infection experiments demonstrated that CH/HLJ/20 caused rapid disease onset and 100% mortality in neonatal piglets, with severe villous atrophy and high intestinal viral loads. These findings highlight the evolving genomic diversity, pathogenicity, and zoonotic potential of PDCoV, underscoring the critical importance of continuous viral surveillance, timely isolation and functional characterization of emerging strains, and enhanced understanding of cross-species transmission mechanisms to inform effective disease control and prevention strategies.

Indexed as

Coronavirus InfectionsDeltacoronavirusDiarrheaSwine DiseasesAmino Acid SubstitutionAnimalsCD13 AntigensChinaGenome, ViralMolecular Docking SimulationPhylogenySpike Glycoprotein, CoronavirusSwineVirulenceWhole Genome SequencingCD13 AntigensSpike Glycoprotein, Coronavirusaminopeptidase Ncross-species transmissionpathogenicityPorcine deltacoronavirusrecombination

Identifiers

PMID41408166
PMCPMC12721090

What OpenQuestion holds

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LicenceCC BY-NC
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.