Evidence map›Paper›PMID 41408089›Full record

ArticleScientific reports2025

Spatial mapping of influenza and coronavirus receptors in the respiratory and intestinal tract epithelium of beef cattle using advanced PixF image analysis.

Ning-Chieh Twu, Yee Chuen Teoh, Curwen Pei Hong Tan, Riza Danudoro, Xiaoyi Cheng, Raquel Espin-Palazon, Todd Bell, Luis Giménez-Lirola, Ratul Chowdhury, Rahul Kumar Nelli

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Article in Scientific reports, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Ning-Chieh Twu *Department of Veterinary Diagnostic and Production Animal Medicine, Iowa State University, Ames, IA, USA.
Yee Chuen Teoh *Department of Computer Science, Iowa State University, Ames, IA, USA.
Curwen Pei Hong TanDepartment of Computer Science, Iowa State University, Ames, IA, USA.
Riza DanudoroDepartment of Computer Science, Iowa State University, Ames, IA, USA.
Xiaoyi ChengDepartment of Genetics, Development and Cell Biology, Iowa State University, Ames, IA, USA.
Raquel Espin-PalazonDepartment of Genetics, Development and Cell Biology, Iowa State University, Ames, IA, USA.
Todd BellDepartment of Veterinary Pathology, Iowa State University, Ames, IA, USA.
Luis Giménez-LirolaDepartment of Veterinary Diagnostic and Production Animal Medicine, Iowa State University, Ames, IA, USA.
Ratul ChowdhuryNanovaccine Institute, Iowa State University, Ames, IA, USA. ratul@iastate.edu.
Rahul Kumar NelliDepartment of Veterinary Diagnostic and Production Animal Medicine, Iowa State University, Ames, IA, USA. rknelli@iastate.edu.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Influenza A viruses (IAV) and coronaviruses (CoV) pose significant threats to various animal species, including cattle. Reports of SARS-CoV-2 infections and recent outbreaks of highly pathogenic avian influenza (HPAI H5N1) in dairy cattle highlight the need to understand receptor distributions critical for viral entry. This study investigates the spatial distribution of IAV and CoV receptors in bovine tissues using PixF, a novel and newly developed web-based image analysis tool. Respiratory (trachea and lung) and intestinal (small and large intestine) tissues from crossbred Holstein-Angus steers were analyzed. Lectin histochemistry staining with fluorescently labeled Sambucus nigra (SA α2,6-Gal receptors) and Maackia amurensis (SA α2,3-Gal receptors) identified IAV receptors, while coronavirus receptors ACE2, TMPRSS2, APN, DPP4, and CEACAM1 were assessed using indirect immunofluorescence. PixF provides an initial yet tailored image processing framework for quantifying and mapping receptor expression, revealing a predominance of SA α2,3-Gal receptors in epithelial regions, while SA α2,6-Gal receptors were confined to glandular tissues of the respiratory tract. Coronavirus receptors exhibited variable expression across tissues; TMPRSS2, APN, and DPP4 are highly expressed in the respiratory mucosal epithelium; ACE2, TMPRSS2, and DPP4 are highly expressed in the intestinal mucosal epithelium, while CEACAM1 is notably low across tissues. These findings demonstrate the potential utility of PixF, a simple prototypic fluorescence quantification tool customized for the use case detailed in this work, to provide a browser interface that prioritizes ease-of-use, enabling non-specialists to obtain essential quantification and spatial information quickly. PixF was utilized to elucidate receptor co-localization and enhance our understanding of host-pathogen interactions in cattle, offering a reproducible, accessible, and biologically informed analysis pipeline.

Indexed as

Image Processing, Computer-AssistedInfluenza A virusIntestinal MucosaReceptors, CoronavirusReceptors, VirusRespiratory MucosaAngiotensin-Converting Enzyme 2AnimalsCattleLungMaleAngiotensin-Converting Enzyme 2Receptors, CoronavirusReceptors, VirusACE2Beef cattleCoronavirusInfluenza virusIntestinal tractRespiratory tractSialic acid

Identifiers

PMID41408089
PMCPMC12712102

What OpenQuestion holds

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LicenceCC BY-NC-ND
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.