Evidence map›Paper›PMID 41406943›Full record

ArticleCell reports. Medicine2025

Lymphodepleting chemotherapy potentiates neoantigen-directed T cell therapy by enhancing antigen presentation.

Shira Sagie, Tomer Babu, Chen Weller, Claire Tabachnik, Ido Livneh, Nele P Quast, Nofar Gumpert, Alina Shomuradova, Matthew I Raybould, Ronen Levy and 22 more

Abstract read
In one paragraph

Article in Cell reports. Medicine, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Review
  2. Article
  3. Article
  4. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

32 authors.

Shira SagieDepartment of Molecular Cell Biology, Weizmann Institute of Science, Rehovot 7610001, Israel; Jusidman Cancer Center, Sheba Medical Center, Ramat Gan 52621, Israel.
Tomer BabuDepartment of Molecular Cell Biology, Weizmann Institute of Science, Rehovot 7610001, Israel.
Chen WellerDepartment of Molecular Cell Biology, Weizmann Institute of Science, Rehovot 7610001, Israel.
Claire TabachnikDepartment of Molecular Cell Biology, Weizmann Institute of Science, Rehovot 7610001, Israel.
Ido LivnehRappaport Technion Cancer Research center, The Rappaport Faculty of Medicine, Technion-Israel Institute of Technology, Haifa 3525433, Israel; Institute of Pathology, Rambam Health Care Campus, Haifa 3109601, Israel.
Nele P QuastDepartment of Statistics, University of Oxford, OX1 3LB Oxford, UK.
Nofar GumpertDepartment of Molecular Cell Biology, Weizmann Institute of Science, Rehovot 7610001, Israel.
Alina ShomuradovaSir William Dunn School of Pathology, University of Oxford, OX1 3RE Oxford, UK.
Matthew I RaybouldDepartment of Statistics, University of Oxford, OX1 3LB Oxford, UK.
Ronen LevyDepartment of Molecular Cell Biology, Weizmann Institute of Science, Rehovot 7610001, Israel.
Dmitry MalkoDepartment of Molecular Cell Biology, Weizmann Institute of Science, Rehovot 7610001, Israel.
Adi AlfiaDepartment of Biomolecular Sciences, Weizmann Institute of Science, Rehovot 7610001, Israel.
Talal Ben LuluDepartment of Molecular Cell Biology, Weizmann Institute of Science, Rehovot 7610001, Israel.
Michal AlonDepartment of Molecular Cell Biology, Weizmann Institute of Science, Rehovot 7610001, Israel.
Franco HerreraDepartment of Molecular Cell Biology, Weizmann Institute of Science, Rehovot 7610001, Israel.
Mikhail KutuzovSir William Dunn School of Pathology, University of Oxford, OX1 3RE Oxford, UK.
Mirie ZerbibDepartment of Veterinary Resources, Weizmann Institute of Science, Rehovot 7610001, Israel.
Polina GreenbergDepartment of Molecular Cell Biology, Weizmann Institute of Science, Rehovot 7610001, Israel.
Talya Wasserman-BartovDepartment of Molecular Cell Biology, Weizmann Institute of Science, Rehovot 7610001, Israel.
Gil BenedekFaculty of Medicine, Hadassah Hebrew-University Medical Center, Jerusalem 91120, Israel.
Yishai LevinINCPM, Weizmann Institute of Science, Rehovot 7610001, Israel.
Chani StosselJusidman Cancer Center, Sheba Medical Center, Ramat Gan 52621, Israel; Faculty of Medical and Health Sciences, Tel Aviv University, Tel Aviv 6997801, Israel.
Iris KamerJusidman Cancer Center, Sheba Medical Center, Ramat Gan 52621, Israel; Faculty of Medical and Health Sciences, Tel Aviv University, Tel Aviv 6997801, Israel.
Talia GolanJusidman Cancer Center, Sheba Medical Center, Ramat Gan 52621, Israel; Faculty of Medical and Health Sciences, Tel Aviv University, Tel Aviv 6997801, Israel.
Roni OrenDepartment of Veterinary Resources, Weizmann Institute of Science, Rehovot 7610001, Israel.
Merav ShmueliDepartment of Systems Immunology, Weizmann Institute of Science, Rehovot 7610001, Israel.
Osnat BartokDepartment of Molecular Cell Biology, Weizmann Institute of Science, Rehovot 7610001, Israel.
Jair BarJusidman Cancer Center, Sheba Medical Center, Ramat Gan 52621, Israel; Faculty of Medical and Health Sciences, Tel Aviv University, Tel Aviv 6997801, Israel.
Jonathan CohenSharett Institute of Oncology, Hadassah Cancer Research Institute and The Wohl Institute for Translational Medicine, Hadassah-Hebrew University Medical Center, Jerusalem 91120, Israel.
Omer DushekSir William Dunn School of Pathology, University of Oxford, OX1 3RE Oxford, UK.
Charlotte M DeaneDepartment of Statistics, University of Oxford, OX1 3LB Oxford, UK.
Yardena SamuelsDepartment of Molecular Cell Biology, Weizmann Institute of Science, Rehovot 7610001, Israel. Electronic address: yardena.samuels@weizmann.ac.il.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Adoptive cell therapy (ACT) targeting tumor-specific antigens holds promise for solid tumors, but limited neoantigen presentation remains a key barrier to efficacy. Here, we identify and characterize a T cell receptor (TCR), T104, for the KRAS.G12V mutation, a prevalent neoantigen in colorectal, lung, and pancreatic cancers. TCR-T104 selectively recognizes and kills KRAS.G12V-expressing tumor cells. Combining T cell therapy with lymphodepleting chemotherapy significantly enhances tumor cell killing, particularly by TCR-T cells, tumor-infiltrating lymphocytes (TILs), and T cell engager antibodies across multiple cancer types and target antigens. Mechanistically, chemotherapy upregulates immunoproteasome activity and human leukocyte antigen (HLA)-I surface expression. HLA-immunopeptidome analyses reveal that chemotherapy remodels the antigenic landscape across tumor cell lines and in vivo models, increasing peptide abundance and hydrophobicity while altering proteasomal cleavage preferences. These findings establish a synergistic role for chemotherapy in enhancing neoantigen presentation and T cell-mediated tumor recognition and suggest that fine-tuning these regimens could improve ACT efficacy, particularly in tumors with low-abundance neoantigens.

Indexed as

Antigen PresentationAntigens, NeoplasmImmunotherapy, AdoptiveLymphocyte DepletionT-LymphocytesAnimalsCell Line, TumorHumansLymphocytes, Tumor-InfiltratingMiceNeoplasmsProto-Oncogene Proteins p21(ras)Receptors, Antigen, T-CellAntigens, NeoplasmProto-Oncogene Proteins p21(ras)Receptors, Antigen, T-CellAdoptive Cell therapycolon cancerimmunopeptidomicsimmunoproteasomeKRAS G12Vlung cancerlymphodepleting chemotherapyneoantigenspancreatic cancerTCR-T therapy

Identifiers

PMID41406943
PMCPMC12765948

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.