Evidence map›Paper›PMID 41403886›Full record

ReviewMicrobiome research reports2025

Approaches to dissect the vitamin biosynthetic network of the gut microbiota.

Chiara Tarracchini, Francesca Bottacini, Leonardo Mancabelli, Gabriele Andrea Lugli, Francesca Turroni, Douwe van Sinderen, Marco Ventura, Christian Milani

Abstract readReview
In one paragraph

Review in Microbiome research reports, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Chiara TarracchiniLaboratory of Probiogenomics, Dept. Chemistry, Life Sciences and Environmental Sustainability, University of Parma, Parma 43124, Italy.
Francesca BottaciniAPC Microbiome Ireland, University College Cork, Cork T12 YN60, Ireland.
Leonardo MancabelliDepartment of Medicine and Surgery, University of Parma, Parma 43124, Italy.
Gabriele Andrea LugliLaboratory of Probiogenomics, Dept. Chemistry, Life Sciences and Environmental Sustainability, University of Parma, Parma 43124, Italy.
Francesca TurroniLaboratory of Probiogenomics, Dept. Chemistry, Life Sciences and Environmental Sustainability, University of Parma, Parma 43124, Italy.
Douwe van SinderenAPC Microbiome Ireland, University College Cork, Cork T12 YN60, Ireland.
Marco VenturaLaboratory of Probiogenomics, Dept. Chemistry, Life Sciences and Environmental Sustainability, University of Parma, Parma 43124, Italy.
Christian MilaniLaboratory of Probiogenomics, Dept. Chemistry, Life Sciences and Environmental Sustainability, University of Parma, Parma 43124, Italy.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

B-group vitamins and vitamin K are essential micronutrients required for numerous cellular processes in both microbial and human physiology. While traditionally considered to originate predominantly from dietary sources, the biosynthetic capacity of the human gut microbiota has recently been recognized as a valuable, though historically underappreciated, endogenous source of these vitamins. In particular, the microbial contribution to the host vitamin pool is increasingly acknowledged as a functionally relevant aspect of vitamin homeostasis, especially in the colon, where microbiota-derived vitamins may be absorbed via specific transport mechanisms. This review provides a comprehensive overview of our current understanding of the biosynthesis of B-group vitamins and vitamin K by human gut-associated bacteria, with particular emphasis on key methodologies employed to assess if, how and to what extent members of the gut microbiota supply their host with such micronutrients. Through an integrated overview of available evidence, we highlight both the progress made and the outstanding challenges in elucidating the microbial contribution to the host vitamin metabolism.

Indexed as

metagenomicsmicrobe-microbe interactionMicrobiome

Identifiers

PMID41403886
PMCPMC12702654

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.