Evidence map›Paper›PMID 41403646›Full record

ArticleFrontiers in microbiology2025

Differential impacts of hemin and free iron on amoxicillin susceptibility in

Francesco Pagano, Devin H Bemis, Rahiya Rehman, Jason M Shapiro, Peter Belenky

Abstract read
In one paragraph

Article in Frontiers in microbiology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Francesco PaganoDepartment of Molecular Microbiology and Immunology, Brown University, Providence, RI, United States.
Devin H BemisDepartment of Molecular Microbiology and Immunology, Brown University, Providence, RI, United States.
Rahiya RehmanDivision of Pediatric Gastroenterology, Hepatology and Nutrition, Saint Louis University School of Medicine, Saint Louis, MO, United States.
Jason M ShapiroDivision of Pediatric Gastroenterology, Nutrition and Liver Diseases, Hasbro Children's Hospital, Providence, RI, United States.
Peter BelenkyDepartment of Molecular Microbiology and Immunology, Brown University, Providence, RI, United States.

Funding

Relating impacts of antibiotics on the gut metabolome and microbiome to host physiology and weight.R01DK125382 · NIDDK · BROWN UNIVERSITY · PI BELENKY, PETER · 2020 to 2024
$2.7M
Alleviating antibiotic-induced microbiome dysfunction by quenching the microbial redox environmentR56AT012463 · NCCIH · BROWN UNIVERSITY · PI BELENKY, PETER · 2024 to 2024
$340k
NCCIH NIH HHS R56 AT012463NIDDK NIH HHS R01 DK125382
6 · The paper itself

Abstract

Introduction: The rise of antibiotic-resistant infections worldwide has created a need to enhance the efficacy of existing antibiotics. Modification of metabolism has been shown to potentiate antibiotic lethality. In this study, we employed a novel ex vivo microbiome culture approach to study the effects of different forms of iron on amoxicillin susceptibility. Methods: Synthetic and human stool-derived microbiota were cultured and treated with amoxicillin, with growth monitored by optical density. These samples were sequenced using an Oxford nanopore long-read 16S rRNA V4-V9 approach and computationally defined using the Emu algorithm. The validity of this pipeline was confirmed with consortia, murine cecal content, and a human stool sample. The stool-derived community was then cultured for 24 h with ranging concentrations of either hemin, FeSO Results: Alpha diversity, beta diversity, and normalized relative abundances confirmed the efficacy of the selected Discussion: This

Indexed as

16S rRNA sequencingantibiotic susceptibilitybeta lactam antibioticsex vivo gut microbiome cultureheminiron metabolismmetabolic modulationmicrobial metabolism

Identifiers

PMID41403646
PMCPMC12702856

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.