Evidence map›Paper›PMID 41402467›Full record

ArticleNature cell biology2025

Modelling co-development between the somites and neural tube in human trunk-like structures.

Komal Makwana, Louise Tilley, Probir Chakravarty, Jamie Thompson, Peter Baillie-Benson, Ignacio Rodriguez-Polo, Naomi Moris

Abstract read
In one paragraph

Article in Nature cell biology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed.

  1. Review
  2. Review
  3. Review
  4. Review
  5. Review
  6. Article
  7. Review
  8. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Komal Makwana *The Francis Crick Institute, London, UK.
Louise Tilley *The Francis Crick Institute, London, UK.
Probir ChakravartyThe Francis Crick Institute, London, UK.
Jamie ThompsonThe Francis Crick Institute, London, UK.
Peter Baillie-BensonThe Francis Crick Institute, London, UK.
Ignacio Rodriguez-PoloThe Francis Crick Institute, London, UK.
Naomi MorisThe Francis Crick Institute, London, UK. naomi.moris@crick.ac.uk.ORCID http://orcid.org/0000-0003-1910-5454

Funding

Deutsche Forschungsgemeinschaft (German Research Foundation) RO 6917/1-1, project 509071720Klaus Tschira Stiftung (Klaus Tschira Foundation) K45, 2022National Centre for the Replacement Refinement and Reduction of Animals in Research (NC3Rs) NC/C023102/01RCUK | Biotechnology and Biological Sciences Research Council (BBSRC) BB/Y00311X/1RCUK | Engineering and Physical Sciences Research Council (EPSRC) EP/Y009967/1RCUK | Medical Research Council (MRC) MR/V005367/2Wellcome Trust CC2186
6 · The paper itself

Abstract

Human stem cell-based embryo models provide experimentally amenable in vitro systems for developmental research. A key feature of embryo models is their multi-lineage differentiation, which allows for the study of tissue co-development. Here we develop human trunk-like structures that have morphologically organized somites and a neural tube that form through self-organized, endogenous signalling. Transcriptomic comparison with human embryo datasets suggests that human trunk-like structure cells approximate Carnegie stage 13-14 (28-35 days after fertilization). The absence of a notochord leads to a dorsal identity, but exogenous Sonic Hedgehog signalling activation ventralizes both the somites and the neural tube in a dose-dependent manner. We further identify reciprocal signalling: neural tube-derived cues induce medial ALDH1A2 in somites, which in turn generate retinoic acid signals that drive spontaneous neural-tube patterning. Together, our data highlight the value of modularity in embryo models, which we leverage to explore human trunk co-development.

Indexed as

Body PatterningNeural TubeSomitesTorsoAldehyde Dehydrogenase 1 FamilyCell DifferentiationGene Expression Regulation, DevelopmentalHedgehog ProteinsHuman Embryonic Stem CellsHumansModels, BiologicalNotochordRetinal DehydrogenaseSignal TransductionTretinoinAldehyde Dehydrogenase 1 FamilyHedgehog ProteinsRetinal DehydrogenaseSHH protein, humanTretinoin

Identifiers

PMID41402467
PMCPMC12717004

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.