Evidence map›Paper›PMID 41400233›Full record

ArticleThe journal of applied laboratory medicine2026

Mapping the Literature on the Impact of Gastrointestinal Multiplexed Pathogen Panels on Clinical and Healthcare Utilization Outcomes: A Scoping Review.

Ahmed Babiker, N Esther Babady, A Brian Mochon, Amity L Roberts, Kileen L Shier, J Nicole Jackson, James Scott Parrott

Abstract readScoping Review
In one paragraph

Article in The journal of applied laboratory medicine, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Ahmed BabikerDivision of Infectious Diseases, Department of Internal Medicine, Rush University Medical Center, Chicago, IL, United States.ORCID 0000-0003-0578-4871
N Esther BabadyClinical Microbiology Service, Department of Pathology and Laboratory Medicine , Memorial Sloan Kettering Cancer Center, New York, NY, United States.
A Brian MochonDivision of Pathology and Laboratory Medicine, Phoenix Children's Hospital, Phoenix, AZ, United States.
Amity L RobertsDepartment of Pathology and Laboratory Medicine, Hartford Hospital, Hartford CT, United States.
Kileen L ShierQuest Diagnostics, Chantilly, VA, United States.
J Nicole JacksonAmerican Society for Microbiology, Washington, DC, United States.
James Scott ParrottDepartment of Interdisciplinary Studies, Rutgers School of Health Professions, Newark, NJ, United States.

Funding

X-RAY CRYSTALLOGRAPHYP30CA008748 · NCI · SLOAN-KETTERING INSTITUTE FOR CANCER RES · PI SELWYN M VICKERS · 1985 to 2026
$347.4M
Antibacterial Resistance Leadership Group (ARLG)UM1AI104681 · NIAID · DUKE UNIVERSITY · PI Vance G. Fowler, Henry F HENRY CHAMBERS · 2013 to 2026
$180.8M
National Institute of Allergy and Infectious Diseases UM1AI104681NCI NIH HHS P30 CA008748NIAID NIH HHS UM1 AI104681NIH
6 · The paper itself

Abstract

backgroundGastrointestinal pathogen multiplex panels (GPPs) can test a single stool specimen for multiple pathogen targets in less than 5 h with some as little as 1 h. Although GPPs have demonstrated rapid and sensitive detection, their increased cost and unclear reimbursement structures have put into question their value and role in the cost-effective management of patients with gastrointestinal infections. We performed a scoping review to identify and systematically map the existing literature regarding the impact of GPPs on immediate, proximal, and distal clinical and healthcare utilization outcomes across healthcare settings.

methodsDatabases were searched from inception until November 22, 2022. Full research articles in English were eligible for inclusion if they included a multiplexed (≥3 targets) nucleic acid amplification testing method and conventional microbiology comparator method performed on clinical samples.

resultsA total of 6027 potential studies were identified. Following title and abstract screening and full article review, 175 studies were included. The most frequently studied GPPs were laboratory-developed tests (LDTs) (34.9%) and the Biofire® FilmArray® Gastrointestinal Panel (22.3%). The majority of these studies were conducted in the inpatient (37.1%), outpatient (28.0%), and emergency department (ED) (14.0%) settings. The most frequently reported outcomes included diagnostic accuracy (69.7%), organism detection (59%), time to diagnosis (12.6%), and antibiotic changes (8.6%).

conclusionWe identified a paucity of research reporting on proximal and distal outcomes associated with GPP use. Our review highlights the critical need for well-designed studies focusing on downstream clinical and healthcare utilization outcomes to guide meaningful and cost-effective incorporation of GPPs into diagnostic work flows.

Indexed as

Gastrointestinal DiseasesMolecular Diagnostic TechniquesPatient Acceptance of Health CareFecesHumans

Identifiers

PMID41400233
PMCPMC12776536

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.