Evidence map›Paper›PMID 41398938›Full record

ArticleBMC geriatrics2025

Evaluation of protein profile in vitreous samples of patients with naive age-related macular degeneration using proteomic approaches.

Hamza Kose, Berna Ozkan, Aylin Kanli, Levent V Karabas, Gurler Akpinar, Murat Kasap, Fatma Sumer

Erratum issuedAbstract read
In one paragraph

Article in BMC geriatrics, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

7 authors.

Hamza KoseDepartment of Ophthalmology, Abdulkadir Yuksel State Hospital, Gaziantep, Sahinbey, 27100, Türkiye.ORCID http://orcid.org/0000-0001-5805-6873
Berna OzkanDepartment of Ophthalmology, Acıbadem Mehmet Ali Aydınlar University School of Medicine, Istanbul, 34752 , Türkiye.ORCID http://orcid.org/0000-0002-2212-4448
Aylin KanliDepartment of Medical Biology, Faculty of Medicine, Kocaeli University, İzmit, Kocaeli, 41001, Türkiye.ORCID http://orcid.org/0000-0002-0674-0072
Levent V KarabasDepartment of Ophthalmology, Faculty of Medicine, Kocaeli University, İzmit, 41001, Türkiye.ORCID http://orcid.org/0000-0003-4271-4741
Gurler AkpinarDepartment of Medical Biology, Faculty of Medicine, Kocaeli University, İzmit, Kocaeli, 41001, Türkiye.ORCID http://orcid.org/0000-0002-9675-3714
Murat KasapDepartment of Medical Biology, Faculty of Medicine, Kocaeli University, İzmit, Kocaeli, 41001, Türkiye.ORCID http://orcid.org/0000-0001-8527-2096
Fatma SumerDepartment of Ophthalmology, Faculty of Medicine, Recep Tayyip Erdogan University, Rize, 53100, Türkiye. fatmasumer_@hotmail.com.ORCID http://orcid.org/0000-0002-4146-8190

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundAge-related macular degeneration (AMD) represents one of the most common causes of permanent vision impairment in individuals over 50 years of age.

methodsThis study aims to characterize AMD using proteomic analysis to enhance diagnosis and treatment strategies. In a prospective case-control clinical trial, vitreous fluids (VF) from thirteen AMD patients were collected during surgery and analyzed by 2DE-based MALDI TOF-TOF MS/MS. PANTHER and STRING analyses were performed to investigate the biological relationships between the identified proteins and to determine relevant cellular pathways.

resultsA total of 11 proteins were differentially regulated between AMD patients and healthy controls. Among them, Apolipoprotein E was significantly up-regulated (↑3-fold), while ten proteins, including alpha-crystallin A chain (↓779-fold), beta-crystallin B2 (↓232-fold), and haptoglobin (↓15-fold), were markedly down-regulated. These quantitative differences underscore the critical role of lipid metabolism, oxidative stress response, and inflammation in AMD pathogenesis.

conclusionThe identified proteins are related to biological regulation, retinal protection, and regulation of inflammation and angiogenesis processes. The up-regulation of Apolipoprotein E highlights its involvement in lipid metabolism and inflammatory modulation, while the sharp down-regulation of crystallin family proteins suggests compromised retinal protection against oxidative stress and apoptosis. These protein alterations provide new insights into AMD pathogenesis and may serve as potential biomarkers for early diagnosis and novel therapeutic targets in managing the disease.

Indexed as

Eye ProteinsMacular DegenerationProteomicsVitreous BodyAgedAged, 80 and overBiomarkersCase-Control StudiesFemaleHumansMaleMiddle AgedProspective StudiesBiomarkersEye Proteins2D gel electrophoresisAge-related macular degeneration (AMD)Alpha-crystallinAngiogenesisApolipoprotein eBiomarkersInflammationProteomicsVitreous fluid

Identifiers

PMID41398938
PMCPMC12706984

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.