Evidence map›Paper›PMID 41398057›Full record

ArticleNPJ digital medicine2025

H&E-based MSI/MMR testing with AI in colorectal cancer: a multi-centred blinded evaluation.

Cher Bass, Foivos Ntelemis, Julian Schmidt, Steffen Wolf, André Geraldes, Debapriya Mehrotra, Shikha Singhal, Narender Kumar, Angelica Marcia, Nicholas Bennett and 18 more

Abstract read
In one paragraph

Article in NPJ digital medicine, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Review
  2. Review
  3. Review
  4. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

28 authors.

Cher BassPanakeia Technologies, Salisbury House, Station Road, CB1 2LA, Cambridge, United Kingdom. cher@panakeia.ai.
Foivos NtelemisPanakeia Technologies, Salisbury House, Station Road, CB1 2LA, Cambridge, United Kingdom.
Julian SchmidtPanakeia Technologies, Salisbury House, Station Road, CB1 2LA, Cambridge, United Kingdom.
Steffen WolfPanakeia Technologies, Salisbury House, Station Road, CB1 2LA, Cambridge, United Kingdom.
André GeraldesPanakeia Technologies, Salisbury House, Station Road, CB1 2LA, Cambridge, United Kingdom.
Debapriya MehrotraPanakeia Technologies, Salisbury House, Station Road, CB1 2LA, Cambridge, United Kingdom.
Shikha SinghalPanakeia Technologies, Salisbury House, Station Road, CB1 2LA, Cambridge, United Kingdom.
Narender KumarPanakeia Technologies, Salisbury House, Station Road, CB1 2LA, Cambridge, United Kingdom.
Angelica MarciaPanakeia Technologies, Salisbury House, Station Road, CB1 2LA, Cambridge, United Kingdom.
Nicholas BennettWomen's Health Research Group, Leeds Institute of Cancer & Pathology, Wellcome Trust Brenner Building, St James's University Hospital, University of Leeds, Beckett Street, Leeds, LS9 7TF, United Kingdom.
Oscar MaiquesBarts Cancer Institute, Queen Mary University of London, Charterhouse Square, London, EC1M 6BQ, United Kingdom.
Mitchell HydeWomen's Health Research Group, Leeds Institute of Cancer & Pathology, Wellcome Trust Brenner Building, St James's University Hospital, University of Leeds, Beckett Street, Leeds, LS9 7TF, United Kingdom.
Bejal MistryWomen's Health Research Group, Leeds Institute of Cancer & Pathology, Wellcome Trust Brenner Building, St James's University Hospital, University of Leeds, Beckett Street, Leeds, LS9 7TF, United Kingdom.
Grace RogersonWomen's Health Research Group, Leeds Institute of Cancer & Pathology, Wellcome Trust Brenner Building, St James's University Hospital, University of Leeds, Beckett Street, Leeds, LS9 7TF, United Kingdom.
Michele CummingsWomen's Health Research Group, Leeds Institute of Cancer & Pathology, Wellcome Trust Brenner Building, St James's University Hospital, University of Leeds, Beckett Street, Leeds, LS9 7TF, United Kingdom.
Clare FreerWomen's Health Research Group, Leeds Institute of Cancer & Pathology, Wellcome Trust Brenner Building, St James's University Hospital, University of Leeds, Beckett Street, Leeds, LS9 7TF, United Kingdom.
Elizabeth WalshWomen's Health Research Group, Leeds Institute of Cancer & Pathology, Wellcome Trust Brenner Building, St James's University Hospital, University of Leeds, Beckett Street, Leeds, LS9 7TF, United Kingdom.
Manuel Salto-TellezQueen's University Belfast, School of Medicine, Dentistry and Biomedical Sciences, Patrick G Johnston Centre for Cancer Research, 97 Lisburn Rd, Belfast, BT9 7AE, Belfast, United Kingdom.
Maurice LoughreyQueen's University Belfast, School of Medicine, Dentistry and Biomedical Sciences, Patrick G Johnston Centre for Cancer Research, 97 Lisburn Rd, Belfast, BT9 7AE, Belfast, United Kingdom.
In Hwa UmSchool of Medicine, University of St Andrews, North Haugh, St Andrews, KY16 9TF, United Kingdom.
David J HarrisonSchool of Medicine, University of St Andrews, North Haugh, St Andrews, KY16 9TF, United Kingdom.
Richard ClarksonWales Cancer Biobank, Cardiff University, 2nd Floor, Room 2LB4 64, A Block, UHW Main Building, Heath Park, Cardiff, CF14 4XN, United Kingdom.
James BlackwoodPanakeia Technologies, Salisbury House, Station Road, CB1 2LA, Cambridge, United Kingdom.
J Carl BarrettUniversity of North Carolina at Chapel Hill, Chapel Hill, NC, USA.
Jakob Nikolas KatherElse Kroener Fresenius Center for Digital Health, Faculty of Medicine and University Hospital Carl Gustav Carus, TUD Dresden University of Technology, 01307, Dresden, Germany.
Nicolas M OrsiWomen's Health Research Group, Leeds Institute of Cancer & Pathology, Wellcome Trust Brenner Building, St James's University Hospital, University of Leeds, Beckett Street, Leeds, LS9 7TF, United Kingdom.
Pahini PandyaPanakeia Technologies, Salisbury House, Station Road, CB1 2LA, Cambridge, United Kingdom.
Salim ArslanPanakeia Technologies, Salisbury House, Station Road, CB1 2LA, Cambridge, United Kingdom.

Funding

UK Smart Grant 10054824
6 · The paper itself

Abstract

Mismatch repair (MMR) deficiency occurs in 10-20% of colorectal cancer (CRC) cases, leading to microsatellite instability (MSI). Although MSI/MMR testing is critical for CRC management, high costs and long turnaround times limit testing rates and clinical utility, highlighting the need for more accessible, cost-effective alternatives. PANProfiler Colorectal (PPC) is an artificial intelligence (AI)-based biomarker test that determines MSI/MMR status directly from haematoxylin and eosin (H&E)-stained slides. We conducted a blinded, multi-centred validation to assess PPC's performance against standard testing. The study included 3,576 whole slide images from 1,243 CRC patients across three United Kingdom institutions. PPC produced definitive results for 86.55% of slides, achieving an overall agreement of 93.83%, positive agreement of 92.54%, and negative agreement of 94.02%. PPC accurately determined MSI/MMR status from routine H&E slides, offering a rapid, scalable alternative to conventional diagnostic methods.

Identifiers

PMID41398057
PMCPMC12800188

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.