Evidence map›Paper›PMID 41397952›Full record

ArticleAdvanced science (Weinheim, Baden-Wurttemberg, Germany)2026

SUPER: Upcycling Genetic Parts for Precise Gene Expression Control, Leakage Minimization, and Genetic Circuit Stability.

Taeyang Heo, Dongwon Park, Woosub Shin, Jongmin Kim

Abstract read
In one paragraph

Article in Advanced science (Weinheim, Baden-Wurttemberg, Germany), 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Taeyang HeoDepartment of Life Sciences, Pohang University of Science and Technology, Pohang, 37673, South Korea.
Dongwon ParkDepartment of Life Sciences, Pohang University of Science and Technology, Pohang, 37673, South Korea.
Woosub ShinDepartment of Life Sciences, Pohang University of Science and Technology, Pohang, 37673, South Korea.
Jongmin KimDepartment of Life Sciences, Pohang University of Science and Technology, Pohang, 37673, South Korea.ORCID https://orcid.org/0000-0002-2713-1006

Funding

Funding for open access charge: Korea Health Industry Development Institute RS-2023-00304637Gyeongbuk Technopark (GBTP) GBTP2023129001Korea Basic Science Institute 2021R1A6C101A390Korea Health Industry Development Institute RS-2023-00304637Korea Institute of Planning and Evaluation for Technology in Food, Agriculture and Forestry RS-2024-00402136Korea Institute of Planning and Evaluation for Technology in Food, Agriculture and Forestry RS-2024-00403998Ministry of Education BK21 FOUR (4120240315124)National Research Foundation of Korea NRF-2021R1A6A1A10042944National Research Foundation of Korea NRF-2022R1F1A1066642National Research Foundation of Korea RS-2025-00561294
6 · The paper itself

Abstract

A long-standing goal of synthetic biology is to reprogram cells by rewiring genetic parts. Despite the expanding library of genetic parts, construction of integrated synthetic circuits with desired specifications remains challenging in part due to intricate dependence on sequence contexts, where unexpected narrow dynamic ranges and leaky expression can plague system performance. To provide an alternative approach to the screening process of iterative design-build-test cycles, SUPER (Synthetic Upcycling Platform for Engineering Regulators), a modular platform for upcycling genetic devices is introduced. Inspired by antagonistic regulation mechanisms, SUPER employs small RNA as an add-on controller to modulate gene expression patterns without genetic modification of target regulators. SUPER not only enhances the performance of RNA-, chemical-, temperature-, and protein-responsive regulators up to 1011%, but also allows to cover an expanded dynamic range up to 22 018.9-fold. This enhanced control can provide genetic circuit stability, particularly under strong selective pressures, as demonstrated with a Holin-expressing kill switch integrated with SUPER, maintaining stable functionality for over 30 days. Finally, SUPER combines with an environmental sensor, TlpA36, functioning as a chemical- and temperature-responsive 2-input kill switch. Featuring straightforward design, minimal cellular burden, and expanded tunability, SUPER provides a systematic upcycling framework for genetic circuit construction in biotechnology.

Indexed as

Gene Expression RegulationGene Regulatory NetworksGenetic EngineeringSynthetic BiologyEscherichia colibiosensorgenetic circuit stabilitygenetic devicekill switchleakage minimizationsmall RNAsynthetic biology

Identifiers

PMID41397952
PMCPMC12948289

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.