Evidence map›Paper›PMID 41394736›Full record

ArticlebioRxiv : the preprint server for biology2025

Structural atlas of

Fenglin Li, Nathan Bellis, Ravi K Lokareddy, Chun-Feng David Hou, Ruoyu Yang, Steven Branston, Zsuzsanna Kovach, Renae Geier, Angela Soriaga, Lucy Sim and 4 more

Abstract readPreprint
PubMed Full text at PMC Publisher
In one paragraph

Article in bioRxiv : the preprint server for biology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

14 authors.

Fenglin LiDept. of Biochemistry and Biophysics, Perelman School of Medicine at the University of Pennsylvania, 3620 Hamilton Walk, Philadelphia, PA 19104, USA.
Nathan BellisDept. of Biochemistry and Molecular Genetics, University of Alabama at Birmingham, 1825 University Blvd, Birmingham, AL 35294, USA.
Ravi K LokareddyDept. of Biochemistry and Molecular Genetics, University of Alabama at Birmingham, 1825 University Blvd, Birmingham, AL 35294, USA.
Chun-Feng David HouInstitute for Quantitative Biomedicine, Rutgers, The State University of New Jersey, Piscataway, NJ, 08854, USA.
Ruoyu YangDept. of Biochemistry and Biophysics, Perelman School of Medicine at the University of Pennsylvania, 3620 Hamilton Walk, Philadelphia, PA 19104, USA.
Steven BranstonArmata Pharmaceuticals Inc., 5005 McConnell Ave, Los Angeles, CA 90066, USA.
Zsuzsanna KovachArmata Pharmaceuticals Inc., 5005 McConnell Ave, Los Angeles, CA 90066, USA.
Renae GeierArmata Pharmaceuticals Inc., 5005 McConnell Ave, Los Angeles, CA 90066, USA.
Angela SoriagaArmata Pharmaceuticals Inc., 5005 McConnell Ave, Los Angeles, CA 90066, USA.
Lucy SimArmata Pharmaceuticals Inc., 5005 McConnell Ave, Los Angeles, CA 90066, USA.
Pierre KymeArmata Pharmaceuticals Inc., 5005 McConnell Ave, Los Angeles, CA 90066, USA.
Deborah BirxArmata Pharmaceuticals Inc., 5005 McConnell Ave, Los Angeles, CA 90066, USA.
Sebastien LemireArmata Pharmaceuticals Inc., 5005 McConnell Ave, Los Angeles, CA 90066, USA.
Gino CingolaniDept. of Biochemistry and Molecular Genetics, University of Alabama at Birmingham, 1825 University Blvd, Birmingham, AL 35294, USA.ORCID 0000-0002-9206-9640

Funding

WORK ORDER 126643 B539 EXPAND IC SUITE75N91019D00024 · NIAID · LEIDOS BIOMEDICAL RESEARCH, INC. · PI BRISCOE, LYNN · 2019 to 2025
$3932.6M
XRAY CRYSTALLOGRAPHYP30CA013148 · NCI · UNIVERSITY OF ALABAMA AT BIRMINGHAM · PI Omer Jamy · 1985 to 2026
$165.9M
The Stanford-SLAC CryoEM Center supplementU24GM129541 · NIGMS · STANFORD UNIVERSITY · PI CHIU, WAH, HEDMAN, BRITT · 2018 to 2023
$54.8M
Mechanism of Viral Genome Delivery into CellsR35GM140733 · NIGMS · UNIVERSITY OF ALABAMA AT BIRMINGHAM · PI CINGOLANI, GINO · 2021 to 2025
$2.8M
Multisubunit viral ATPases that couple ATP-hydrolysis to genome translocationR01GM100888 · NIGMS · THOMAS JEFFERSON UNIVERSITY · PI CINGOLANI, GINO · 2012 to 2020
$2.5M
Acquisition of cryo-electron microscopeS10OD024978 · OD · UNIVERSITY OF ALABAMA AT BIRMINGHAM · PI DOKLAND, TERJE · 2020 to 2020
$2.0M
NCI NIH HHS 75N91019D00024NCI NIH HHS P30 CA013148NIGMS NIH HHS R01 GM100888NIGMS NIH HHS R35 GM140733NIGMS NIH HHS U24 GM129541NIH HHS S10 OD024978
6 · The paper itself

Abstract

Bacteriophages of the

Indexed as

bacterial adhesioncryo-EMcystic fibrosisgenome ejectionPakpunavirusphage therapyPseudomonas virus P7-1tail fibertail fiberstape measure protein

Identifiers

PMID41394736
PMCPMC12697256

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.