Evidence map›Paper›PMID 41392268›Full record

ArticleCommunications biology2025

A chemically inducible, leakless Cre recombinase by split-protein-based efficient and enhanced degradation (SPEED).

Dewen Cai, Fuun Kawano, Takahiro Otabe, Koji Hashimoto, Moritoshi Sato

Abstract read
In one paragraph

Article in Communications biology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Dewen Cai *Graduate School of Arts and Sciences, The University of Tokyo, Meguro-ku, Tokyo, Japan.ORCID http://orcid.org/0009-0001-2406-3597
Fuun Kawano *Graduate School of Arts and Sciences, The University of Tokyo, Meguro-ku, Tokyo, Japan.
Takahiro OtabeGraduate School of Arts and Sciences, The University of Tokyo, Meguro-ku, Tokyo, Japan.ORCID http://orcid.org/0000-0001-7029-1913
Koji HashimotoGraduate School of Arts and Sciences, The University of Tokyo, Meguro-ku, Tokyo, Japan.ORCID http://orcid.org/0000-0001-8024-0060
Moritoshi SatoGraduate School of Arts and Sciences, The University of Tokyo, Meguro-ku, Tokyo, Japan. moritoshisato@g.ecc.u-tokyo.ac.jp.ORCID http://orcid.org/0000-0002-3095-5831

Funding

Japan Agency for Medical Research and Development (AMED) 25bm1123018h0003MEXT | Japan Society for the Promotion of Science (JSPS) 19K23716MEXT | Japan Society for the Promotion of Science (JSPS) 20K15394MEXT | Japan Society for the Promotion of Science (JSPS) 22K05311MEXT | Japan Society for the Promotion of Science (JSPS) 22K18338MEXT | Japan Society for the Promotion of Science (JSPS) 25H00909MEXT | JST | Core Research for Evolutional Science and Technology (CREST) JPMJCR23B4MEXT | JST | Precursory Research for Embryonic Science and Technology (PRESTO) JPMJPR1783Mochida Memorial Foundation for Medical and Pharmaceutical Research not applicableNaito Foundation not applicableTakeda Science Foundation not applicable
6 · The paper itself

Abstract

Chemically inducible DNA recombination systems are a very attractive tool for implementing potent genetic applications. However, conventional systems still suffer from leaky properties in the absence of chemicals. Here we describe a chemically inducible, leakless destabilized Cre recombinase (SPEED-Cre) based on a new approach, split-protein-based efficient and enhanced degradation (SPEED), that consists of a self-assembling split-Cre tagged with a destabilizing domain (DD) mutant from the Escherichia coli dihydrofolate reductase that is stabilized by the antibiotic ligand trimethoprim (TMP). We demonstrate that SPEED-Cre has no significant leak activity of background DNA recombination in the absence of TMP; nevertheless, it enables full induction of TMP-dependent Cre-loxP recombination in human cells and living mice. We also demonstrate the general applicability of the SPEED approach, which can be widely applied to other proteins, by showing high TMP-dependent recombination performances of destabilized Flp, VCre and Dre recombinases based on the SPEED approach. This robust platform technology will greatly enhance chemogenetic applications for genome engineering in living systems.

Indexed as

IntegrasesAnimalsEscherichia coliEscherichia coli ProteinsHEK293 CellsHumansMiceProteolysisRecombination, GeneticTetrahydrofolate DehydrogenaseTrimethoprimCre recombinaseEscherichia coli ProteinsIntegrasesTetrahydrofolate DehydrogenaseTrimethoprim

Identifiers

PMID41392268
PMCPMC12824266

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LicenceCC BY-NC-ND
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.