Evidence map›Paper›PMID 41390708›Full record

ArticleScientific reports2025

Optimizing crop clustering to minimize pathogen invasion in agriculture.

Yevhen F Suprunenko, Christopher A Gilligan

Abstract read
In one paragraph

Article in Scientific reports, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

Yevhen F SuprunenkoDepartment of Plant Sciences, University of Cambridge, Downing Street, Cambridge, CB2 3EA, UK. ys526@cam.ac.uk.ORCID http://orcid.org/0000-0001-5927-7571
Christopher A GilliganDepartment of Plant Sciences, University of Cambridge, Downing Street, Cambridge, CB2 3EA, UK.ORCID http://orcid.org/0000-0002-6845-0003

Funding

Gates Foundation INV-010472
6 · The paper itself

Abstract

The initial rate of pathogen invasion in crops is influenced by the spatial clustering of susceptible crops and the characteristics of pathogen dispersal. Previous studies have shown that various degrees of crop clustering can effectively reduce this invasion rate. However, the optimal degrees of clustering that minimize pathogen invasion have not previously been identified. This study aims to determine analytically the range of crop clustering that minimizes the initial rate of pathogen invasion. We studied artificial agricultural landscapes with crop areas arranged in identical square clusters on a regular square lattice. For pathogen dispersal, we used several common dispersal kernels, including Gaussian, negative exponential, and power-law. The optimal degree of clustering, defined by cluster size and separation distance, was calculated using a new analytical approximation for the pathogen invasion rate, which showed strong agreement with computer simulations. Additionally, we analysed a realistic cassava landscape at risk of invasion by cassava brown streak virus. We identified a range of optimal cluster sizes and corresponding separation distances that minimize pathogen invasion rates for various dispersal kernels and landscapes with clusters of crop fields arranged on a regular square lattice. The methods can be extended to other geometrical configurations, such as long narrow fields. Using a cassava landscape as an example, we show how optimal crop clustering strategies can be derived to mitigate the potential invasion of cassava brown streak virus. The methods provides analytical insights that can help farmers and agricultural planners to optimize the spatial structure of agricultural landscapes to minimize initial pathogen invasion rates.

Indexed as

AgricultureCrops, AgriculturalPlant DiseasesCluster AnalysisComputer SimulationManihot

Identifiers

PMID41390708
PMCPMC12783119

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.