Evidence map›Paper›PMID 41389301›Full record

ArticleBrazilian journal of microbiology : [publication of the Brazilian Society for Microbiology]2025

Genomics of Saccharomyces cariocanus G01, a potential aromatic brewing yeast from Brazil.

Scarlate Nobre Linhares, João Ricardo Vidal Amaral, Laura Maia de Oliveira, Eamim Daidrê Squizani, Cinara Souza da Conceição, Carlos Alberto Xavier Gonçalves, Sheila da Silva, José Roberto de Assis Ribeiro, Selma Soares de Oliveira, Andrew Macrae and 2 more

Abstract read
In one paragraph

Article in Brazilian journal of microbiology : [publication of the Brazilian Society for Microbiology], 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors.

Scarlate Nobre Linhares *Laboratório de Microbiologia de Alimentos, Departamento de Microbiologia Médica, Instituto de Microbiologia, Universidade Federal do Rio de Janeiro, Cidade Universitária, Rio de Janeiro, 21941-902, Brasil. scarlatenlinhares@gmail.com.ORCID http://orcid.org/0009-0006-7022-6250
João Ricardo Vidal Amaral *Laboratório de Biotecnologia Sustentável e Bioinformática Microbiana, Departamento de Microbiologia Geral, Instituto de Microbiologia, Universidade Federal do Rio de Janeiro, Cidade Universitária, Rio de Janeiro, 21941-902, Brasil.
Laura Maia de OliveiraLaboratório de Microbiologia de Alimentos, Departamento de Microbiologia Médica, Instituto de Microbiologia, Universidade Federal do Rio de Janeiro, Cidade Universitária, Rio de Janeiro, 21941-902, Brasil.
Eamim Daidrê SquizaniInstituto SENAI de Inovação em Biossintéticos e Fibras, Cidade Universitária, Rio de Janeiro, 21941-857, Brasil.
Cinara Souza da ConceiçãoInstituto SENAI de Inovação em Biossintéticos e Fibras, Cidade Universitária, Rio de Janeiro, 21941-857, Brasil.
Carlos Alberto Xavier GonçalvesInstituto SENAI de Inovação em Biossintéticos e Fibras, Cidade Universitária, Rio de Janeiro, 21941-857, Brasil.
Sheila da SilvaLaboratório de Biotecnologia Sustentável e Bioinformática Microbiana, Departamento de Microbiologia Geral, Instituto de Microbiologia, Universidade Federal do Rio de Janeiro, Cidade Universitária, Rio de Janeiro, 21941-902, Brasil.
José Roberto de Assis RibeiroLaboratório de Biotecnologia Sustentável e Bioinformática Microbiana, Departamento de Microbiologia Geral, Instituto de Microbiologia, Universidade Federal do Rio de Janeiro, Cidade Universitária, Rio de Janeiro, 21941-902, Brasil.
Selma Soares de OliveiraPrograma de Pós-Graduação de Biotecnologia Vegetal e Bioprocessos da Universidade Federal do Rio de Janeiro, Av. Prof. Rodolpho Paulo Rocco, s/n- Prédio do CCS-Bloco K, 2° Andar-Sala 032, Rio de Janeiro, 21941-902, Brasil.
Andrew MacraeLaboratório de Biotecnologia Sustentável e Bioinformática Microbiana, Departamento de Microbiologia Geral, Instituto de Microbiologia, Universidade Federal do Rio de Janeiro, Cidade Universitária, Rio de Janeiro, 21941-902, Brasil.
Allen Norton HaglerLaboratório de Biotecnologia Sustentável e Bioinformática Microbiana, Departamento de Microbiologia Geral, Instituto de Microbiologia, Universidade Federal do Rio de Janeiro, Cidade Universitária, Rio de Janeiro, 21941-902, Brasil.
Marco Antônio Lemos MiguelLaboratório de Microbiologia de Alimentos, Departamento de Microbiologia Médica, Instituto de Microbiologia, Universidade Federal do Rio de Janeiro, Cidade Universitária, Rio de Janeiro, 21941-902, Brasil.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The expanding beer market and the need for innovation in the sector has driven scientific research to find novel, non-conventional aromatic yeast strains. In this context, Saccharomyces cariocanus UFRJ 50816T, isolated from remnants of the Atlantic Forest in Rio de Janeiro, was later found to be able to ferment sugars present in beer wort, producing a beverage with unique aromas. As a result of sequential propagation in beer wort, several derived strains (G01, S01 and D01) were obtained by spontaneous adaptation. Saccharomyces cariocanus G01 is a derivative strain that ferments maltose better than its parental strain. Here, we present the first whole-genome sequence for the species S. cariocanus. Phylogenetic identification was performed via multilocus sequence analysis, using five genomic regions: ITS, SSU, LSU, TEF1 and RPB2. The strain’s maltose fermentation ability was confirmed through Durham tube fermentation assays, and supported by the identification of key MAL genes in its genome. Additionally, genes related to the production of aroma and flavor compounds were identified, including ATF1, ATF2 and IAH1, associated with a banana-like aroma, and PAD1 and FDC1, which contribute to a clove-like aroma. Although based solely on genomic inference, these findings are consistent with the banana and clove-like aromas perceived in a brewed pilot batch produced with S. cariocanus G01. Given these characteristics, S. cariocanus G01 shows strong potential for the development of beers as well as Brazilian cachaças.

Indexed as

BeerGenome, FungalSaccharomycesBrazilFermentationGenomicsPhylogenyBeerCachaçaMaltose-fermentationSaccharomyces cariocanus

Identifiers

PMID41389301
PMCPMC12701881

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.