Evidence map›Paper›PMID 41388530›Full record

ArticleGenome biology and evolution2026

The Golden Lancehead Genome Reveals Distinct Selective Processes Acting on Venom Genes of an Island Endemic Snake.

Pedro G Nachtigall, Andrew J Mason, Darin R Rokyta, H Lisle Gibbs, Felipe G Grazziotin, Inácio L M Junqueira-de-Azevedo

Abstract read
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Article in Genome biology and evolution, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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1 · What the graph read from it

What it found

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2 · The registry

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3 · Its place in the literature

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4 · The record

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5 · Who and what money

Authors and funding

6 authors.

Pedro G NachtigallLaboratório de Toxinologia Aplicada, CeTICS, Instituto Butantan, São Paulo, SP, BR.ORCID 0000-0002-3196-0173
Andrew J MasonDepartment of Evolution, Ecology, and Organismal Biology, Ohio State University, Columbus, OH, USA.ORCID 0000-0003-0297-1313
Darin R RokytaDepartment of Biological Science, Florida State University, Tallahassee, FL, USA.ORCID 0000-0002-0356-2178
H Lisle GibbsDepartment of Evolution, Ecology, and Organismal Biology, Ohio State University, Columbus, OH, USA.ORCID 0000-0001-7461-3393
Felipe G GrazziotinLaboratório de Coleções Zoológicas, LCZ, Instituto Butantan, São Paulo, SP, BR.ORCID 0000-0001-9896-9722
Inácio L M Junqueira-de-AzevedoLaboratório de Toxinologia Aplicada, CeTICS, Instituto Butantan, São Paulo, SP, BR.ORCID 0000-0003-4491-0180

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

High-quality genomic resources are important for accurate assessments of adaptive evolution in rapidly evolving island endemic species. The golden lancehead (Bothrops insularis) is a critically endangered venomous species endemic to the Queimada Grande island located on the southeast coast of Brazil, with no reference genome available. Here, we present a high-quality near chromosome-level and well-annotated genome for the golden lancehead. A macrosyntenic analysis using genomes from other viper species revealed that microchromosomes present higher rearrangements consisting of fission and fusion events. Using our genome and genomic data from eight individuals, we conducted a survey of the genetic variation of toxin genes, which included the nucleotide diversity and copy-number variation (CNV). We also inferred a demographic history for the species in the last 100,000 years. The genetic variation analysis revealed that major components of B. insularis venom appear to be evolving largely under natural selection processes rather than genetic drift as expected for an insular species. PLA2s and CTLs are under balancing selection, whereas SVMPs and SVSPs are under positive selection. The CNV suggests recent duplication events in SVMPs and CTLs and deletion events in SVSPs and PLA2s. The demographic history indicates a stable population size over the last 10,000 years, suggesting that B. insularis is both genetically and demographically healthy. Altogether, we provide a genomic resource to better understand the differentiation of an iconic snake and evidence that selection has driven the evolution of diverse venom genes over short evolutionary timescales in an insular species.

Indexed as

BothropsCrotalid VenomsGenomeSelection, GeneticAnimalsBrazilDNA Copy Number VariationsEvolution, MolecularGenetic VariationVenomous SnakesCrotalid Venomsconservationislandsnaketoxin evolutionvenomics

Identifiers

PMID41388530
PMCPMC12758475

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