Evidence map›Paper›PMID 41387949›Full record

ArticleScientific reports2025

Green manure-induced shifts in nematode communities associated with soil bacterial and fungal biomes.

Atsuya Sudo, Daisuke Yoshimura, Hiroyuki Daimon, Shusei Sato, Erika Asamizu

Abstract read
In one paragraph

Article in Scientific reports, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Atsuya SudoDepartment of Life Sciences, Faculty of Agriculture, Ryukoku University, 1-5 Yokotani Seta Oe-cho, Otsu, 520-2194, Shiga, Japan.
Daisuke YoshimuraDepartment of Agricultural Sciences, Faculty of Agriculture, Ryukoku University, 1-5 Yokotani Seta Oe-cho, Otsu, 520-2194, Shiga, Japan.
Hiroyuki DaimonDepartment of Agricultural Sciences, Faculty of Agriculture, Ryukoku University, 1-5 Yokotani Seta Oe-cho, Otsu, 520-2194, Shiga, Japan.
Shusei SatoGraduate School of Life Sciences, Tohoku University, 2-1-1 Katahira, Aoba-ku, Sendai, 980-857, Miyagi, Japan.
Erika AsamizuDepartment of Life Sciences, Faculty of Agriculture, Ryukoku University, 1-5 Yokotani Seta Oe-cho, Otsu, 520-2194, Shiga, Japan. easamizu@agr.ryukoku.ac.jp.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Green manures are widely used to enhance soil health and suppress plant-parasitic nematodes, and their effects on the broader soil food web have been studied. Beyond direct suppression, the role of green manures in supporting and sustaining soil food webs has attracted increasing attention. In this study, we evaluated the use of DNA sequencing to identify various nematode genera and their microbial associates in a field trial using oat (Avena sativa) and hairy vetch (Vicia villosa) as green manures. Nematode index analysis revealed that the oat treatment promoted a structured nematode community. Furthermore, the nematode community structure observed in the oat treatment was linked to specific bacterial and fungal genera. Several beneficial fungi were identified, indicating that oats, used as a green manure, actively enhanced the microbiome. Our results showed that enriching the micro-food web through organic fertilizers can help in the detection of beneficial microorganisms, with the nematode index serving as a potential indicator.

Indexed as

BacteriaFungiManureMicrobiotaNematodaSoil MicrobiologyAnimalsAvenaFood ChainSoilManureSoilGreen manureNematode indexOat (Avena sativa)rRNA amplicon sequenceSoil bacteriaSoil fungi

Identifiers

PMID41387949
PMCPMC12800154

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.