Evidence map›Paper›PMID 41386888›Full record

ArticleJournal, genetic engineering & biotechnology2025

Full genome sequences of two strains of Pseudomonas stutzeri isolated from oil reservoirs and their adaptation mechanisms to harsh environments.

Qijun Wu, Sanbao Su, Yuxiao Han, Shuyuan Deng, Bo Wang, Yuehui She, Fan Zhang

Abstract read
In one paragraph

Article in Journal, genetic engineering & biotechnology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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0citing papers in PubMed
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1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Qijun WuSchool of Energy Resources, China University of Geosciences (Beijing), Beijing 100083, China.
Sanbao SuSinopec Group Zhongyuan Oilfield Exploration Bureau Co., Ltd. Water Supply Branch, China.
Yuxiao HanSchool of Energy Resources, China University of Geosciences (Beijing), Beijing 100083, China.
Shuyuan DengSchool of Energy Resources, China University of Geosciences (Beijing), Beijing 100083, China.
Bo WangSchool of Energy Resources, China University of Geosciences (Beijing), Beijing 100083, China.
Yuehui SheSchool of Petroleum Engineering, Yangtze University, Wuhan 430100, China; Hubei Key Laboratory of Drilling and Production Engineering for Oil and Gas, Wuhan 430100, China; State Key Laboratory of Low Carbon Catalysis and Carbon Dioxide Utilization, Wuhan 430100, China. Electronic address: sheyuehui@163.com.
Fan ZhangSchool of Energy Resources, China University of Geosciences (Beijing), Beijing 100083, China. Electronic address: fanzhang@cugb.edu.cn.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Pseudomonas stutzeri is a type of microorganism widely present in nature, particularly in petroleum-contaminated environments, where it exhibits a high capacity for biodegradation. In this study, two strains of Pseudomonas stutzeri 1W1-1A and DW2-1A, were isolated from oil-water samples from Dagang Oilfield and their whole genomes were sequenced. The whole genome of 1W1-1A is 4,454,378 bp in size, with a GC content of 64.23 % in its single circular chromosome; the whole genome of DW2-1A is 3,967,155 bp in size, with a GC content of 62.98 % in its single circular chromosome. Comparing these two strains with Pseudomonas sp. in the NCBI database, we counted the strains with genes related to hydrocarbon oxidation, nitrate, sulfite, and oxygen reduction in the genome and their global distribution. Genes related to hydrocarbon oxidation, nitrate, sulfite, and oxygen reduction were found in the genome, revealing the survival strategies and adaptation mechanisms of Pseudomonas in extreme oil reservoir environments, including its genomic characteristics, functional gene distribution, and tolerance to different environmental conditions. These findings enrich our understanding of the ecological adaptability and functional evolution of Pseudomonas, providing a new perspective for research in microbial ecology and environmental microbiology. The results of this study offer new strain resources and a scientific basis for microbial enhanced oil recovery (MEOR). Utilizing the hydrocarbon degradation capabilities and biosurfactant production characteristics of these strains is of great significance for microbial industrial applications such as MEOR and the remediation of petroleum-contaminated environments.

Indexed as

Extreme oil reservoir environmentsGenome geographyHydrocarbon degradationPetroleum industry applicationsPseudomonas stutzeriWhole-genome sequencing

Identifiers

PMID41386888
PMCPMC12681787

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.