Evidence map›Paper›PMID 41385321›Full record

ArticleNucleic acids research2025

Beyond RNA modification: a novel role for tRNA modifying enzyme in oxidative stress response and metabolism.

Louna Fruchard, Claudia Sudol, Caroline Rouard, Aurore Treffkorn-Maurau, Léo Hardy, Julia Bos, Magalie Duchateau, Quentin Giai Gianetto, Mariette Matondo, Frédéric Bonhomme and 7 more

Abstract read
In one paragraph

Article in Nucleic acids research, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

  1. Article
  2. Compendium of RNA modifications for bacterial stress adaptation.Microbiology and molecular biology reviews : MMBR · 2026
    Review
  3. Article
  4. Article
  5. Article
  6. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors.

Louna FruchardEpitranscriptomic and translational responses to antibacterial stress Team, Expression Génétique Microbienne, CNRS UMR8261, Institut Pasteur, Université Paris Cité, Institut de Biologie Physico-Chimique, 75005 Paris, France.
Claudia SudolSorbonne Université, Collège Doctoral, Paris F-75005, France.
Caroline RouardInstitut Pasteur, Université Paris Cité, Unité des bactéries pathogènes entériques, CNR Vibrions et choléra, Paris 75015, France.
Aurore Treffkorn-MaurauEpitranscriptomic and translational responses to antibacterial stress Team, Expression Génétique Microbienne, CNRS UMR8261, Institut Pasteur, Université Paris Cité, Institut de Biologie Physico-Chimique, 75005 Paris, France.
Léo HardyEpitranscriptomic and translational responses to antibacterial stress Team, Expression Génétique Microbienne, CNRS UMR8261, Institut Pasteur, Université Paris Cité, Institut de Biologie Physico-Chimique, 75005 Paris, France.
Julia BosInstitut Pasteur, Université Paris Cité, Unité Plasticité du Génome Bactérien, CNRS UMR3525, 75015 Paris, France.
Magalie DuchateauInstitut Pasteur, Université Paris Cité, Proteomics Platform, Mass Spectrometry for Biology Unit, UAR CNRS 2024, Paris 75015, France.
Quentin Giai GianettoInstitut Pasteur, Université Paris Cité, Proteomics Platform, Mass Spectrometry for Biology Unit, UAR CNRS 2024, Paris 75015, France.
Mariette MatondoInstitut Pasteur, Université Paris Cité, Proteomics Platform, Mass Spectrometry for Biology Unit, UAR CNRS 2024, Paris 75015, France.
Frédéric BonhommeInstitut Pasteur, Université Paris Cité, Epigenetic Chemical Biology Unit, UMR 3523, CNRS, Paris 75015, France.
Quentin ThuillierUniversité de Lorraine, CNRS, INSERM, UMS2008/US40 IBSLor, EpiRNA-Seq Core Facility, Nancy F-54000, France.
Virginie MarchandUniversité de Lorraine, CNRS, INSERM, UMS2008/US40 IBSLor, EpiRNA-Seq Core Facility, Nancy F-54000, France.
Yuri MotorinUniversité de Lorraine, CNRS, INSERM, UMS2008/US40 IBSLor, EpiRNA-Seq Core Facility, Nancy F-54000, France.ORCID 0000-0002-8018-334X
Damien BregeonSorbonne Université, CNRS UMR8263, INSERM U1345, Dev2A, IBPS, Paris F-75005, France.ORCID 0000-0003-1113-7574
Didier MazelInstitut Pasteur, Université Paris Cité, Unité Plasticité du Génome Bactérien, CNRS UMR3525, 75015 Paris, France.ORCID 0000-0001-6482-6002
Djemel HamdaneSorbonne Université, CNRS UMR8263, INSERM U1345, Dev2A, IBPS, Paris F-75005, France.ORCID 0000-0002-1737-8320
Zeynep BaharogluEpitranscriptomic and translational responses to antibacterial stress Team, Expression Génétique Microbienne, CNRS UMR8261, Institut Pasteur, Université Paris Cité, Institut de Biologie Physico-Chimique, 75005 Paris, France.ORCID 0000-0003-3477-2685

Funding

Agence Nationale de la Recherches ANR-10-INBS-09Agence Nationale de la Recherches ANR-21-CE35-0012Agence Nationale de la Recherches ANR-24-CE12-7224Centre National de la Recherche Scientifique UMR3525Fondation pour la Recherche Médicale EQU202103012569Institut Pasteur ANR-24-CE12-7224Institut Pasteur PTR 245-19
6 · The paper itself

Abstract

RNA modifications play a fundamental role in regulating essential cellular processes, including translation fidelity and stress adaptation. While these modifications are installed post-transcriptionally by specialized enzymes, their broader functional roles remain largely unexplored. Here, we uncover an unexpected function for the Vibrio cholerae tRNA dihydrouridine synthase B (VcDusB) beyond its canonical role in tRNA dihydrouridylation. We show that deletion of dusB severely compromises V. cholerae resistance to oxidative stress, not through the loss of tRNA modification, but via disruption of an intrinsic NADPH oxidase activity. Mutational analyses reveal that DusB redox function is essential for survival under oxidative stress. Proteomic and transposon insertion sequencing analysis further linked DusB to NADPH homeostasis and metabolic reprogramming during stress adaptation. These findings redefine DusB as a bifunctional enzyme coupling tRNA modification to redox regulation, expanding the functional repertoire of RNA-modifying enzymes in stress adaptation. More broadly, this work paves the way for exploring the evolutionary versatility of tRNA-modifying enzymes, suggesting that their functions extend far beyond RNA metabolism to direct integration of translational control with cellular redox state.

Indexed as

Bacterial ProteinsOxidative StressRNA Processing, Post-TranscriptionalRNA, TransferVibrio choleraeNADPOxidation-ReductionBacterial ProteinsNADPRNA, Transfer

Identifiers

PMID41385321
PMCPMC12700106

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.