Evidence map›Paper›PMID 41384093›Full record

ArticleBio-protocol2025

Utilizing EdU to Track Leukocyte Recruitment to the Brain.

Zoie K Lipfert, Erika Arias, Ayush Batra, David P Sullivan

Abstract read
In one paragraph

Article in Bio-protocol, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Toward development of a dynamic supramolecular peptide therapy for acute ischemic stroke.Neurotherapeutics : the journal of the American Society for Experimental NeuroTherapeutics · 2026
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Zoie K LipfertKen and Ruth Davee Department of Neurology, Northwestern University Feinberg School of Medicine, Chicago, IL, USA.
Erika AriasDepartment of Pathology, Northwestern University Feinberg School of Medicine, Chicago, IL, USA.
Ayush BatraKen and Ruth Davee Department of Neurology, Northwestern University Feinberg School of Medicine, Chicago, IL, USA.
David P SullivanDepartment of Pathology, Northwestern University Feinberg School of Medicine, Chicago, IL, USA.

Funding

Tumor Environment and Metastasis (TEAM) Research ProgramP30CA060553 · NCI · NORTHWESTERN UNIVERSITY AT CHICAGO · PI Devalingam Mahalingam · 1993 to 2026
$153.9M
Aging Exacerbates Neutrophil Persistence and Negatively Impacts Stroke OutcomesR21AG086751 · NIA · NORTHWESTERN UNIVERSITY AT CHICAGO · PI BATRA, AYUSH, SULLIVAN, DAVID PATRICK · 2024 to 2024
$440k
The Role of Neutrophils in Ischemia/Reperfusion Injury following Acute StrokeF31NS130939 · NINDS · NORTHWESTERN UNIVERSITY AT CHICAGO · PI ARIAS, ERIKA · 2023 to 2025
$119k
NCI NIH HHS P30 CA060553NIA NIH HHS R21 AG086751NINDS NIH HHS F31 NS130939
6 · The paper itself

Abstract

Detecting the proliferation of cells with copper(I)-catalyzed azide-alkyne cycloaddition (click chemistry) and the thymidine analogue, 5-ethynyl-2'-deoxyuridine (EdU), is a simpler and more versatile method than traditional antibody-based approaches. Instead of the harsh series of steps typically used for 5-bromo-2'-deoxyuridine (BrdU) detection, detecting EdU does not require DNA denaturation and is suitable for use with other applications. This approach was implemented in an animal model of ischemic stroke. The following protocol details how to use EdU to label, track, and visualize leukocyte recruitment for flow cytometry and fluorescence microscopy, including the processes for EdU injection and blood and tissue sample preparation. Considerations for timing, dosing, and cell viability are also outlined to tailor the protocol to experimental needs. This method could be applied to various models that require extended tracking periods, as the signal from EdU can last several cell divisions, depending on cell type and condition. Key features • EdU labeling is simple and compatible with routine laboratory methods. • This method is compatible with genetically encoded fluorophores, such as GFP and tdTomato. • EdU incorporation in circulating leukocytes varies depending on the specific cell subtype. • This technique can be adapted to track leukocyte recruitment, including when cells are recruited from the bloodstream.

Indexed as

Cell trackingClick chemistryEdUInflammationNeutrophilsStroke

Identifiers

PMID41384093
PMCPMC12689252

What OpenQuestion holds

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LicenceCC BY-NC
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.