Evidence map›Paper›PMID 41383772›Full record

ArticlebioRxiv : the preprint server for biology2025

VaxjoGNN: A Graph Neural Network for Ontology-Grounded Vaccine Adjuvant Recommendation.

Yuping Zheng, Yongqun He

Abstract readPreprint
In one paragraph

Article in bioRxiv : the preprint server for biology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

Yuping ZhengChinese University of Hong Kong, Shenzhen, Guangdong, China.ORCID 0009-0005-0973-2480
Yongqun HeUniversity of Michigan Medical School, Ann Arbor, MI, USA.ORCID 0000-0001-9189-9661

Funding

VIOLIN 2.0: Vaccine Information and Ontology LInked kNowledgebaseU24AI171008 · NIAID · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI Yongqun He, Junguk Hur · 2022 to 2026
$4.2M
NIAID NIH HHS U24 AI171008
6 · The paper itself

Abstract

The selection of an effective adjuvant is a critical bottleneck in vaccine development, particularly for emerging diseases where experimental data is sparse. While computational methods exist for antigen discovery, the task of directly ranking adjuvants for a given disease context remains largely unaddressed. In this work, we frame disease-adjuvant selection as a top-k recommendation task on a heterogeneous knowledge graph grounded in biomedical ontologies. We propose

Indexed as

Biomedical AIGraph Neural NetworksLearning to RankOntologyRecommendation SystemsVaccine Adjuvants

Identifiers

PMID41383772
PMCPMC12694605

What OpenQuestion holds

Textmetadata
LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.