Evidence map›Paper›PMID 41381900›Full record

ReviewNPJ digital medicine2025

AI-driven virtual cell models in preclinical research: technical pathways, validation mechanisms, and clinical translation potential.

Chunyu Ma, Han Zhang, Yiwei Rao, Xinyu Jiang, Boheng Liu, Zhikang Sun, Zhenyu Song, Yuan Gao, Yuhao Cui, Xinyu Liu and 1 more

Abstract readReview
In one paragraph

Review in NPJ digital medicine, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed.

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  9. Envisioning population-scale immune multi-omics atlas projects.Clinical and translational medicine · 2026
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Chunyu MaDepartment of General Surgery, Xiangya Hospital, Central South University, Changsha, China.
Han ZhangThe First Clinical Medical College, Bengbu Medical University, Bengbu, China.
Yiwei RaoThe First Clinical Medical College, Bengbu Medical University, Bengbu, China.
Xinyu JiangThe First Clinical Medical College, Bengbu Medical University, Bengbu, China.
Boheng LiuThe Second Clinical Medical College, Wenzhou Medical University, Wenzhou, China.
Zhikang SunThe Second Clinical Medical College, Wenzhou Medical University, Wenzhou, China.
Zhenyu SongThe First Clinical Medical College, Bengbu Medical University, Bengbu, China.
Yuan GaoThe First Clinical Medical College, Bengbu Medical University, Bengbu, China.
Yuhao CuiThe First Clinical Medical College, Bengbu Medical University, Bengbu, China.
Xinyu LiuThe First Clinical Medical College, Bengbu Medical University, Bengbu, China.
Zedong LiDepartment of General Surgery, Xiangya Hospital, Central South University, Changsha, China. lizd12366@csu.edu.cn.

Funding

China Postdoctoral Science Foundation 2025M772105National Natural Science Foundation of China No.82503242Natural Science Foundation of Hunan Province 2025JJ60596
6 · The paper itself

Abstract

AI-driven virtual cell models show the potential to transform the paradigm of life sciences research by integrating multimodal omics data (e.g., single-cell transcriptomics and proteomics) with advanced algorithms such as deep generative models and graph neural networks to enable high-precision predictions of drug responses, gene perturbations, and disease progression. These models enable high-precision predictions of drug responses, gene perturbations, and disease progression. This review outlines the technical pathways and validation mechanisms of virtual cells, emphasizing a closed-loop workflow from computational evaluation to experimental verification using CRISPR assays and organoid platforms. The applications of virtual cells in personalized drug screening and disease modeling are highlighted, showcasing their potential to reduce animal testing and optimize therapy. However, challenges in regulatory acceptance, data privacy, and model interpretability remain. Global policy and standardization trends are driving clinical translation, and future advancements will involve cross-disciplinary integration and greater standardization to enhance the impact of virtual cells in precision medicine and drug discovery.

Identifiers

PMID41381900
PMCPMC12789685

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.