Evidence map›Paper›PMID 41379874›Full record

ArticlePloS one2025

Comparative evaluation of five rapid PCR platforms for respiratory virus detection.

Pieter W Smit, Peter de Man, Henk Brand, Simone Breijer, Mariska van Wijk, Adam Meijer, David S Y Ong

Abstract readComparative Study
In one paragraph

Article in PloS one, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Pieter W SmitDepartment of Medical Microbiology and Infection Control, Franciscus Hospital, Rotterdam, the Netherlands.ORCID https://orcid.org/0000-0003-1053-3591
Peter de ManDepartment of Medical Microbiology and Infection Control, Franciscus Hospital, Rotterdam, the Netherlands.
Henk BrandDepartment of Medical Microbiology and Infection Control, Franciscus Hospital, Rotterdam, the Netherlands.
Simone BreijerDepartment of Medical Microbiology and Infection Control, Franciscus Hospital, Rotterdam, the Netherlands.
Mariska van WijkDepartment of Medical Microbiology and Infection Control, Franciscus Hospital, Rotterdam, the Netherlands.
Adam MeijerCentre for Infectious Disease Control, National Institute for Public Health and the Environment, Bilthoven, the Netherlands.ORCID https://orcid.org/0000-0001-8074-7582
David S Y OngDepartment of Medical Microbiology and Infection Control, Franciscus Hospital, Rotterdam, the Netherlands.ORCID https://orcid.org/0000-0001-5688-6443

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundThe demand for rapid molecular diagnostics for respiratory viruses has increased substantially. Several point-of-care PCR platforms have become available, yet comparative performance data remain limited.

objectivesTo evaluate the diagnostic accuracy and operational reliability of four rapid PCR platforms for detection of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2), influenza A and B viruses (IAV, IBV), and respiratory syncytial virus (RSV), in comparison with the GeneXpert (Cepheid, USA) platform.

methodsNasopharyngeal swabs from patients with respiratory symptoms were tested using the GeneXpert, positive samples were subsequently analysed on four alternative systems: the 30-minute and 1-hour M10 (SD Biosensor, South Korea) assays, FlashDetect™ Flash10 (Coyote Bioscience, China), Vivalytic (Bosch Healthcare Solutions, Germany), and Galaxy Lite (Igenesis, China). Additional lower viral load samples and cultured IAV/ IBV strains were included.

resultsA total of 223 GeneXpert positive samples were prospectively analysed. Flash10 showed 94.6% overall agreement, missing SARS-CoV-2 (n = 4, GeneXpert Cycle threshold (Ct) min-max; 37.7-42.2), IAV (n = 5, 32.8-37.7), and IBV (n = 3, 26.5-36.7). Vivalytic showed 83.0% overall agreement, missing SARS-CoV-2 (n = 16, 30.4-42.2), IAV (n = 9, 26.8-37.7), IBV (n = 9, 27.2-36.7), and RSV (n = 4, 31.5-37.0). Galaxy Lite achieved 88.2% overall agreement but failed in 27.2% of test runs. With a smaller sample size the M10 (30-minute) assay showed 98.6% overall agreement with GeneXpert, missing one SARS-CoV-2 case (Ct 39.7).

conclusionAmong four platforms, the M10 (30-min version) and Flash10 platforms demonstrated the highest agreement rates with the GeneXpert. The variability in performance highlights the importance of independent platform evaluation.

Indexed as

COVID-19Polymerase Chain ReactionSARS-CoV-2HumansInfluenza A virusInfluenza B virusNasopharynxReproducibility of ResultsRespiratory Syncytial VirusesSensitivity and Specificity

Identifiers

PMID41379874
PMCPMC12697972

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.