Evidence map›Paper›PMID 41377126›Full record

ArticleJournal of biomedical physics & engineering2025

Deep CNN-based Fully Automated Segmentation of Pelvic Multi-Organ on CT Images for Prostate Cancer Radiotherapy.

Bahram Mofid, Sayed Mohammad Modarres Mosalla, Masumeh Goodarzi, Hassan Tavakoli

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Article in Journal of biomedical physics & engineering, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

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0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

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3 · Its place in the literature

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4 citing papers in PubMed.

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4 · The record

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5 · Who and what money

Authors and funding

4 authors.

Bahram MofidDepartment of Radiation Oncology, Shohadae-Tajrish Medical Center, Shahid Beheshti University of Medical Sciences, Tehran, Iran.
Sayed Mohammad Modarres MosallaDepartment of Nuclear Medicine, Baqiyatallah University of Medical Sciences, Tehran, Iran.
Masumeh GoodarziRadiation Injuries Research Center, Systems Biology and Poisonings Institute, Baqiyatallah University of Medical Sciences, Tehran, Iran.
Hassan TavakoliRadiation Injuries Research Center, Systems Biology and Poisonings Institute, Baqiyatallah University of Medical Sciences, Tehran, Iran.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Background: Manual delineation of volumes for prostate radiotherapy treatment is a time-consuming task for radiation oncologists and is also prone to variability. Deep learning-based auto-segmentation methods showed promising results with accurate and high-fidelity contours. Objective: The objective of this study was to evaluate the feasibility of a Computed Tomography (CT)-based deep learning auto-segmentation algorithm for multi-organ delineation in prostate radiotherapy. Material and Methods: In this single-institution retrospective study, a total of 118 patients with prostate cancer were included. We applied 3D nnU-net deep convolutional neural network architecture, a self-adapting ensemble method for simultaneous fast and reproducible multi-organ auto-contouring. The dataset was randomly divided into training and test sets from 95 and 23 patients, respectively. Intensity-modulated radiotherapy plans were generated for both manual and automatic delineations using identical optimization settings. Contours were assessed in terms of the Dice Similarity Coefficient (DSC), and average Hausdorff Distance (HD). Dose distributions were additionally evaluated using parameters derived from Dose-Volume Histograms (DVH). Results: On the test set, 3D nnU-net achieved the best performance in the bladder (DSC:0.97, HD:4.13), right femur head (DSC:0.96, HD:3.58), left femur head (DSC:0.96, HD:3.95), rectum (DSC:0.9, HD:10.04), prostate (DSC:0.82, HD:3.68), lymph nodes (DSC:0.77, HD:15.5), and seminal vesicles (DSC:0.69, HD:10.95). DVH parameters of targets and Organ at Risks (OARs) were significantly different except for lymph nodes and femoral heads between treatment plans based on manual and automatic contours. Conclusion: The 3D nnU-net architecture can be successfully used for multi-organ segmentation in the male pelvic area.

Indexed as

3D nnU-netAutomatic SegmentationDeep LearningMachine LearningNeural NetworksProstate CancerRadiotherapy

Identifiers

PMID41377126
PMCPMC12686670

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.