Evidence map›Paper›PMID 41373454›Full record

ReviewInternational journal of molecular sciences2025

Satellite DNA Genomics: The Ongoing Story.

Manuel A Garrido-Ramos, Miroslav Plohl, Eva Šatović-Vukšić

Abstract readReview
In one paragraph

Review in International journal of molecular sciences, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed.

  1. Cross-species incompatibilities offer new insights into the functional consequences of satellite DNA evolution.Chromosome research : an international journal on the molecular, supramolecular and evolutionary aspects of chromosome biology · 2026
    Review
  2. Article
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  4. Article
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  7. Satellite DNA evolution in two holocentric species of Edessa true bugs (Hemiptera: Pentatomidae) with unusually high heterochromatin abundance.Chromosome research : an international journal on the molecular, supramolecular and evolutionary aspects of chromosome biology · 2026
    Article
  8. Article
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  10. The role of satellite DNA-enriched heterochromatic variants in reproductive disorders: Insights from standardized cytogenetic analysis.Chromosome research : an international journal on the molecular, supramolecular and evolutionary aspects of chromosome biology · 2026
    Article
  11. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Manuel A Garrido-RamosDepartamento de Genética, Facultad de Ciencias, Universidad de Granada, 18071 Granada, Spain.ORCID 0000-0003-0524-6133
Miroslav PlohlDivision of Molecular Biology, Ruđer Bošković Institute, 10000 Zagreb, Croatia.ORCID 0000-0001-6868-2448
Eva Šatović-VukšićDivision of Molecular Biology, Ruđer Bošković Institute, 10000 Zagreb, Croatia.ORCID 0000-0002-5570-4238

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Tandemly repeated non-coding sequences, widely known as satellite DNAs (satDNAs), are extremely diverse and highly variable components of eukaryotic genomes. In recent years, advances in high-throughput sequencing and new bioinformatics platforms have enabled in-depth studies of all (or nearly all) tandem repeats in any genome (the satellitome), while a growing number of telomere-to-telomere assemblies facilitates their detailed mapping. Research performed on a large number of non-model plant and animal species changed significantly the "classical" view on these sequences, both in an organizational and functional sense, from ballast compacted in the form of heterochromatin to elements that are important for structuring the entire genome, as well as for its functions and evolution. The diversity of repeat families, and the complexity of their intraspecies and interspecies distribution patterns, posed new questions, urging for species-by-species comparative analyses. Here we integrate some basic features of different forms of sequences repeated in tandem and rapidly growing data evidencing extensive dispersal of satDNA sequences in euchromatin, their putative roles and evolutionary significance. Importantly, we also present and discuss various issues brought on by the use of new methodological approaches and point out potential threats to the analysis of satDNAs and satellitomes.

Indexed as

DNA, SatelliteGenomicsAnimalsEvolution, MolecularHeterochromatinHumansPlantsTandem Repeat SequencesTelomereDNA, SatelliteHeterochromatingenome biologygenome evolutionmethodological approaches in satellite DNA researchrepetitive DNArepetitive DNA librarysatellite DNAsatellite DNA genomicssatellite DNA librarytransposable elements

Identifiers

PMID41373454
PMCPMC12692304

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.