Evidence map›Paper›PMID 41372224›Full record

ArticleScientific data2025

High-quality Chromosome-level genome assembly of male and female greater amberjack (Seriola dumerili).

Lei Chen, Yinjun Jiang, Binbin Tao, Yanlong Song, Yang Huang, Guangli Li, Wei Hu, Chunhua Zhu, Ji Chen

Abstract readDataset
In one paragraph

Article in Scientific data, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Lei ChenState Key Laboratory of Breeding Biotechnology and Sustainable Aquaculture, Institute of Hydrobiology, Chinese Academy of Sciences, Hubei Hongshan Laboratory, Wuhan, 430072, China.
Yinjun JiangState Key Laboratory of Breeding Biotechnology and Sustainable Aquaculture, Institute of Hydrobiology, Chinese Academy of Sciences, Hubei Hongshan Laboratory, Wuhan, 430072, China.
Binbin TaoState Key Laboratory of Breeding Biotechnology and Sustainable Aquaculture, Institute of Hydrobiology, Chinese Academy of Sciences, Hubei Hongshan Laboratory, Wuhan, 430072, China.
Yanlong SongState Key Laboratory of Breeding Biotechnology and Sustainable Aquaculture, Institute of Hydrobiology, Chinese Academy of Sciences, Hubei Hongshan Laboratory, Wuhan, 430072, China.
Yang HuangSouthern Marine Science and Engineering Guangdong Laboratory (Zhanjiang), Zhanjiang, 524013, China.
Guangli LiSouthern Marine Science and Engineering Guangdong Laboratory (Zhanjiang), Zhanjiang, 524013, China.
Wei HuState Key Laboratory of Breeding Biotechnology and Sustainable Aquaculture, Institute of Hydrobiology, Chinese Academy of Sciences, Hubei Hongshan Laboratory, Wuhan, 430072, China.
Chunhua ZhuSouthern Marine Science and Engineering Guangdong Laboratory (Zhanjiang), Zhanjiang, 524013, China. zhu860025@163.com.
Ji ChenState Key Laboratory of Breeding Biotechnology and Sustainable Aquaculture, Institute of Hydrobiology, Chinese Academy of Sciences, Hubei Hongshan Laboratory, Wuhan, 430072, China. chenji@ihb.ac.cn.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The greater amberjack (Seriola dumerili) is a species of significant commercial value due to the high nutritional value and tender meat of its flesh. The existing availability of genomic data, which is incomplete and discontinuous, limits molecular biology studies on greater amberjack. Furthermore, it is hard to distinguish the genders of amberjack from their appearance, which is a major drawback for artificial propagation. In this study, chromosome-level genomes of male and female greater amberjack were assembled using PacBio HiFi and Hi-C data. The male and female genomes were anchored on 24 chromosomes, with sizes of 637 Mb and 639.4 Mb, respectively. Genome assembly BUSCO scores were 98.5% and 98.71%, respectively. The functionally annotated genes are 24,112 (87.92%) in males and 23,571 (89.03%) in females, with BUSCO assessment scores of 90.23% and 90.31%, respectively. In conclusion, we successfully assembled high-quality chromosome-level genomes for male and female greater amberjack, providing valuable information for future molecular breeding, species conservation and evolutionary research of greater amberjack.

Indexed as

ChromosomesGenomeAnimalsFemaleMale

Identifiers

PMID41372224
PMCPMC12738666

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.