Evidence map›Paper›PMID 41372137›Full record

ArticleNature communications2025

Structural basis of calcium-dependent C1ql1/BAI3 assemblies in synaptic connectivity.

Liangyu Liao, Ying Han, Fengfeng Niu, Yingjie Wang, Yang Lu, Shun Xu, Houming Zhu, Leishu Lin, Jinman Xiao, Hoi In Tou and 3 more

Abstract read
In one paragraph

Article in Nature communications, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
  2. Adhesion G protein-coupled receptors.Pharmacological reviews · 2026
    Review
  3. Review
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors.

Liangyu Liao *Shenzhen Key Laboratory of Biomolecular Assembling and Regulation, Shenzhen, Guangdong, China.
Ying Han *School of Chemical Biology and Biotechnology, Peking University Shenzhen Graduate School, Shenzhen, Guangdong, China.ORCID http://orcid.org/0000-0002-4336-7967
Fengfeng Niu *Shenzhen Key Laboratory of Biomolecular Assembling and Regulation, Shenzhen, Guangdong, China.ORCID http://orcid.org/0000-0001-7029-4989
Yingjie Wang *Institute of Systems and Physical Biology, Shenzhen Bay Laboratory, Shenzhen, Guangdong, China.
Yang LuDepartment of Neuroscience and Brain Research Center, School of Life Sciences, Southern University of Science and Technology, Shenzhen, Guangdong, China.
Shun XuDepartment of Neuroscience and Brain Research Center, School of Life Sciences, Southern University of Science and Technology, Shenzhen, Guangdong, China.
Houming ZhuDepartment of Neuroscience and Brain Research Center, School of Life Sciences, Southern University of Science and Technology, Shenzhen, Guangdong, China.
Leishu LinShenzhen Key Laboratory of Biomolecular Assembling and Regulation, Shenzhen, Guangdong, China.ORCID http://orcid.org/0000-0002-1214-4760
Jinman XiaoDepartment of Neuroscience and Brain Research Center, School of Life Sciences, Southern University of Science and Technology, Shenzhen, Guangdong, China.
Hoi In TouShenzhen Key Laboratory of Biomolecular Assembling and Regulation, Shenzhen, Guangdong, China.ORCID http://orcid.org/0009-0006-5891-1001
Jiali GaoSchool of Chemical Biology and Biotechnology, Peking University Shenzhen Graduate School, Shenzhen, Guangdong, China.
Bo ZhangSchool of Chemical Biology and Biotechnology, Peking University Shenzhen Graduate School, Shenzhen, Guangdong, China. zbo@pku.edu.cn.ORCID http://orcid.org/0000-0003-2451-0593
Zhiyi WeiShenzhen Key Laboratory of Biomolecular Assembling and Regulation, Shenzhen, Guangdong, China. weizy@sustech.edu.cn.ORCID http://orcid.org/0000-0002-4446-6502

Funding

National Natural Science Foundation of China (National Science Foundation of China) 32471250
6 · The paper itself

Abstract

Cell adhesion molecules (CAMs) are pivotal in establishing and maintaining synaptic connectivity. Emerging evidence indicates that some secreted factors within the synaptic cleft, including C1q-like proteins (C1qls), play a crucial role in bridging pre- and post-synapses by connecting the bilateral CAMs. However, the mechanisms of those secreted factors in synapse assembly remain incomplete. Here, we explore C1ql-mediated synaptic connectivity, focusing on the assembly of C1ql1 and its postsynaptic receptor brain-specific angiogenesis inhibitor 3 (BAI3, also called ADGRB3). Our biochemical, structural, and computational analyses reveal that the trimeric globular C1q (gC1q) domain of C1ql1 undergoes a calcium-modulated domain-swapping event to form a hexamer. Cryo-EM study manifests the stabilizing role of calcium ions on the C1ql1_gC1q hexamer in complex with the extended CUB domain of BAI3. Using the gC1q hexamer, full-length C1ql1 further assembles into linear clusters, possibly providing a scaffold to accumulate BAI3 receptors on the plasma membrane. Our cellular and in vivo studies support a role for the gC1q-mediated dynamic assembly of C1ql1 in receptor accumulation and synapse maintenance. Collectively, our findings provide a plausible mechanism of secreted factor-mediated synaptic connectivity, driven by the calcium-modulated assembly of C1qls and their interactions with CAMs.

Indexed as

CalciumNerve Tissue ProteinsSynapsesAnimalsCryoelectron MicroscopyHEK293 CellsHumansMiceProtein DomainsCalciumNerve Tissue Proteins

Identifiers

PMID41372137
PMCPMC12749725

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.