Evidence map›Paper›PMID 41372130›Full record

ArticleNature communications2025

Systematic identification of bacterial factors driving Staphylococcus aureus intracellular lifestyle in non-professional phagocytes.

Ines Rodrigues Lopes, Laura Maria Alcantara, Maria Lopez-Bravo, Yi Liu, Gerald Larrouy-Maumus, Daniel Lopez, Miguel Mano, Ana Eulalio

Abstract read
In one paragraph

Article in Nature communications, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
  2. Structural insights into RNA recognition by theProceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  3. Article
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Ines Rodrigues LopesRNA & Infection Laboratory, Center for Neuroscience and Cell Biology (CNC-UC), Centre for Innovative Biomedicine and Biotechnology (CIBB), University of Coimbra, Coimbra, Portugal.
Laura Maria AlcantaraRNA & Infection Laboratory, Center for Neuroscience and Cell Biology (CNC-UC), Centre for Innovative Biomedicine and Biotechnology (CIBB), University of Coimbra, Coimbra, Portugal.
Maria Lopez-BravoNational Centre for Biotechnology, Spanish National Research Council (CNB-CSIC), Madrid, Spain.
Yi LiuCentre for Bacterial Resistance Biology (CBRB), Department of Life Sciences, Imperial College London, London, UK.ORCID http://orcid.org/0000-0001-6830-1254
Gerald Larrouy-MaumusCentre for Bacterial Resistance Biology (CBRB), Department of Life Sciences, Imperial College London, London, UK.ORCID http://orcid.org/0000-0001-6614-8698
Daniel LopezNational Centre for Biotechnology, Spanish National Research Council (CNB-CSIC), Madrid, Spain.ORCID http://orcid.org/0000-0002-8627-3813
Miguel ManoFunctional Genomics and RNA-based Therapeutics Laboratory, Center for Neuroscience and Cell Biology (CNC-UC), Centre for Innovative Biomedicine and Biotechnology (CIBB), University of Coimbra, Coimbra, Portugal. miguel.mano@kcl.ac.uk.ORCID http://orcid.org/0000-0003-1922-4824
Ana EulalioRNA & Infection Laboratory, Center for Neuroscience and Cell Biology (CNC-UC), Centre for Innovative Biomedicine and Biotechnology (CIBB), University of Coimbra, Coimbra, Portugal. a.eulalio@imperial.ac.uk.ORCID http://orcid.org/0000-0002-7355-0674

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Staphylococcus aureus is a major human pathogen responsible for severe infections. While traditionally described as extracellular, increasing evidence establishes S. aureus as a facultative intracellular pathogen. Intracellularity contributes to immune evasion, dissemination, and antibiotic failure. To identify bacterial factors critical for S. aureus invasion, intracellular replication, persistence, and host cytotoxicity, we screened a comprehensive collection of 1920 S. aureus mutants (Nebraska Transposon Mutant Library) in epithelial cells across five timepoints (0.5 to 48 hours post-infection). We identified 73 bacterial factors strongly modulating S. aureus intracellularity, including mutants displaying multiple phenotypes. Most of these factors have not been linked to intracellular lifestyle. Among these, we characterized the nicotinamidase PncA as a novel regulator of the agr system via redox state modulation, strongly impacting virulence. This study provides a systematic analysis of S. aureus factors critical for intracellular lifestyle, with implications for the development of antimicrobial strategies targeting this resilient bacterial population.

Indexed as

Bacterial ProteinsPhagocytesStaphylococcal InfectionsStaphylococcus aureusAnimalsEpithelial CellsGene Expression Regulation, BacterialHumansMutationTrans-ActivatorsVirulenceVirulence FactorsAgr protein, Staphylococcus aureusBacterial ProteinsTrans-ActivatorsVirulence Factors

Identifiers

PMID41372130
PMCPMC12696020

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.