Evidence map›Paper›PMID 41369050›Full record

ArticleJournal of phycology2025

A glimpse into darkness: Diversity of culturable cyanobacteria, green algae and fungi from subaerial cave biofilms.

Patrick Jung, Laura Briegel-Williams, Dennis J Nürnberg, Tobith Wolf, Antonio Guillen, Manuel Leira, Michael Lakatos

Abstract read
In one paragraph

Article in Journal of phycology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Patrick JungXCEL - Extreme Cryptogam Ecology Lab, University of Applied Sciences Kaiserslautern, Kaiserslautern, Germany.ORCID https://orcid.org/0000-0002-7607-3906
Laura Briegel-WilliamsXCEL - Extreme Cryptogam Ecology Lab, University of Applied Sciences Kaiserslautern, Kaiserslautern, Germany.ORCID https://orcid.org/0000-0003-3926-8840
Dennis J NürnbergInstitute for Experimental Physics, Freie Universität Berlin, Berlin, Germany.ORCID https://orcid.org/0000-0001-8644-3424
Tobith WolfAstroland Agency, Logroño, Spain.
Antonio GuillenParque Científico y Tecnológico de Cantabria, Santander, Spain.
Manuel LeiraIntegrative Biotechnology, University of Applied Sciences Kaiserslautern, Pirmasens, Germany.
Michael LakatosAstroland Agency, Logroño, Spain.ORCID https://orcid.org/0000-0002-2636-8917

Funding

Carl-Zeiss-Stiftung P2023-03-051Deutsche Forschungsgemeinschaft JU 3228/1-1Deutsche Forschungsgemeinschaft NU 421/1Federal Ministry of Education and Research 03WIR4502AFederal Ministry of Education and Research 03WIR4508AMinistry of Science and Health Rhineland-Palatinate 724-0079#2024/0004-1501 15404University of Applied Sciences Kaiserslautern
6 · The paper itself

Abstract

Caves and hypogean environments provide stable microclimates characterized by uniform temperatures, constant humidity, and low light levels. In such sites, extremely low light irradiance can support the growth of subaerial biofilms (SABs) dominated by unique photosynthetic communities of cyanobacteria accompanied by chlorophytes, heterotrophic bacteria, and fungi. This study aimed to apply a culture-dependent approach to uncover the diversity of cyanobacteria, green algae, and fungi from SABs of a cave in Northern Spain. We isolated a total of 58 cyanobacteria grouped into 21 genera based on their 16S rRNA gene sequences; 24 green algae grouped into 10 genera based on their SSU rRNA gene sequences, and 41 fungi fell into 13 genera according to phylogenies based on the ITS rRNA region between the 16S and 23S rRNA genes (ITS rRNA region). The SABs were dominated by cyanobacteria, which also reflected by high diversity, including calcium-carbonate sheath-producing species such as Geitleria calcarea and Scytonema julianum. Typical cave-inhabiting species such as Chalicogloea cavernicola, Timaviella karstica or Oculatella subterranea were also isolated, alongside potentially new genera and species. Associated green algae were predominantly located closer to the cave entrance and included various lineages of the genera Jenufa and Chromochloris. The fungal community directly derived from the SABs was dominated by decomposers, saprophytes, and phytoparasitic representatives such as Sporobolomyces, Stereum, and Phlebia, with a corresponding set of enzymes that were evaluated for all fungal isolates. The results strongly support the hypothesis that specialized cyanobacterial communities are often located in caves as a result of niche specialization.

Indexed as

BiodiversityBiofilmsCavesChlorophytaCyanobacteriaFungiDarknessPhylogenyRNA, Ribosomal, 16SSpainRNA, Ribosomal, 16Sbiofilmscavesmicrobial diversitysubterranean

Identifiers

PMID41369050
PMCPMC12718444

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.