Evidence map›Paper›PMID 41366833›Full record

ArticleMolecular plant pathology2025

Broadening Virus Resistance Through Gene Pyramiding of eIF4E Family Members.

Masato Suzuki, Masanobu Nishikawa, Toya Yamamoto, Hiroaki Koinuma, Takuya Keima, Yuji Fujimoto, Ken Komatsu, Masayoshi Hashimoto, Yutaro Neriya, Kensaku Maejima and 2 more

Abstract read
In one paragraph

Article in Molecular plant pathology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors.

Masato SuzukiDepartment of Agricultural and Environmental Biology, Graduate School of Agricultural and Life Sciences, The University of Tokyo, Tokyo, Japan.ORCID 0000-0002-8393-9587
Masanobu NishikawaDepartment of Agricultural and Environmental Biology, Graduate School of Agricultural and Life Sciences, The University of Tokyo, Tokyo, Japan.
Toya YamamotoDepartment of Agricultural and Environmental Biology, Graduate School of Agricultural and Life Sciences, The University of Tokyo, Tokyo, Japan.
Hiroaki KoinumaDepartment of Agriculture, School of Agriculture, Tokai University, Kumamoto, Japan.
Takuya KeimaDepartment of Agricultural and Environmental Biology, Graduate School of Agricultural and Life Sciences, The University of Tokyo, Tokyo, Japan.
Yuji FujimotoCollege of Science, Rikkyo University, Tokyo, Japan.
Ken KomatsuGraduate School of Agriculture, Tokyo University of Agriculture and Technology, Tokyo, Japan.
Masayoshi HashimotoFaculty of Agriculture, Shizuoka University, Shizuoka, Japan.
Yutaro NeriyaSchool of Agriculture, Utsunomiya University, Tochigi, Japan.
Kensaku MaejimaDepartment of Agricultural and Environmental Biology, Graduate School of Agricultural and Life Sciences, The University of Tokyo, Tokyo, Japan.
Shigetou NambaDepartment of Agricultural and Environmental Biology, Graduate School of Agricultural and Life Sciences, The University of Tokyo, Tokyo, Japan.ORCID 0000-0002-1473-4633
Yasuyuki YamajiDepartment of Agricultural and Environmental Biology, Graduate School of Agricultural and Life Sciences, The University of Tokyo, Tokyo, Japan.

Funding

Japan Society for the Promotion of Science 23K19344Japan Society for the Promotion of Science 23KJ0759Japan Society for the Promotion of Science 23KK0111
6 · The paper itself

Abstract

Recessive resistance, achieved through mutations in host susceptibility genes, offers an effective way for controlling plant viruses. One well-studied gene family involved in such resistance is the eukaryotic translation initiation factor 4E (eIF4E) gene family, which includes eIF4E, eIFiso4E and the atypical novel cap-binding protein (nCBP). Although gene pyramiding of the eIF4E family may provide a promising strategy for broadening virus resistance, it has so far been applied only to a limited set of gene combinations and target viruses. To deepen our understanding of the practicality of eIF4E family gene pyramiding, we analysed a comprehensive set of eIF4E family knockout mutants and six phylogenetically diverse viruses. Double-gene mutant lines ncbp eif4e1 and ncbp eifiso4e exhibited resistance to five and three viruses, respectively, due to both additive resistance pyramiding and the emergence of novel resistance resulting from combined mutations. Notably, the observed resistance spectrum included the Comovirus, Tymovirus, Betacarmovirus and Tobamovirus genera, which were not previously linked to the eIF4E family. These results reveal a broader involvement of the eIF4E family in viral susceptibility, which may have previously been overlooked due to functional redundancy among the family members. On the other hand, plant growth assessment revealed a more severe penalty in the ncbp eif4e1 mutant than in the ncbp eifiso4e mutant, underscoring the need to select compatible gene combinations for resistance pyramiding. Collectively, this study highlights both the advantages and potential drawbacks of eIF4E family gene pyramiding and provides insights for the future development of crop varieties with broad-spectrum virus resistance.

Indexed as

ArabidopsisDisease ResistanceEukaryotic Initiation Factor-4EPlant DiseasesPlant VirusesGene Knockout TechniquesMultigene FamilyMutationPlant BreedingEukaryotic Initiation Factor-4Ebreedingeukaryotic translation initiation factor 4Egene pyramidinghost factorplant virusvirus resistance

Identifiers

PMID41366833
PMCPMC12689272

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.