Evidence map›Paper›PMID 41366486›Full record

ArticleJournal of translational medicine2025

Atomic force microscopy-based topographical imaging of SARS-CoV-2 as part of a tripartite strategy for RNA virus characterization.

Tanja Deckert-Gaudig, Xiaobin Yao, Erwan Darussalam, Franziska Hornung, Pablo Carravilla, Ziliang Zhao, Kourosh Rezaei, Christian Eggeling, Stefanie Deinhardt-Emmer, Volker Deckert

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Article in Journal of translational medicine, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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1 · What the graph read from it

What it found

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2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

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4 · The record

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5 · Who and what money

Authors and funding

10 authors.

Tanja Deckert-GaudigLeibniz Institute of Photonic Technology, Jena, Germany.ORCID 0000-0002-6648-500X
Xiaobin YaoLeibniz Institute of Photonic Technology, Jena, Germany.
Erwan DarussalamLeibniz Institute of Photonic Technology, Jena, Germany.
Franziska HornungInstitute of Medical Microbiology, Jena University Hospital, Jena, Germany.
Pablo CarravillaLeibniz Institute of Photonic Technology, Jena, Germany.
Ziliang ZhaoLeibniz Institute of Photonic Technology, Jena, Germany.
Kourosh RezaeiInstitute of Physical Chemistry, Friedrich-Schiller University Jena, Jena, Germany.
Christian EggelingLeibniz Institute of Photonic Technology, Jena, Germany.
Stefanie Deinhardt-Emmer *Institute of Medical Microbiology, Jena University Hospital, Jena, Germany. stefanie.deinhardt-emmer@med.uni-jena.de.ORCID 0000-0003-4495-4052
Volker Deckert *Leibniz Institute of Photonic Technology, Jena, Germany. volker.deckert@uni-jena.de.ORCID 0000-0002-0173-7974

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundThe pre-selection of virus particles based on size and morphology is a crucial step toward rapid and reliable virus identification. Pre-selecting virus particles based on size and morphology represents a critical step toward rapid and reliable identification, which is particulary important in clinical settings when novel virus variants emerge. Although conventional fluorescence imaging enables visualization of specific viral structures via labeling, it does not allow for reliable differentiation of structurally similar particles.

methodsIn this study, we present a combined imaging approach that integrates atomic force microscopy (AFM) and double-staining fluorescence microscopy to identify SARS-CoV-2 as a model RNA-virus from other sample constituents.

resultsInitially, topographical imaging via AFM enables high-resolution visualization of individual virus particles, providing detailed information about particle morphology and height. Subsequently, dual fluorescence labeling of the RNA-containing core and the spike protein-rich surface allows for specific identification of intact viral structures. Correlation of fluorescence signals with AFM-derived height maps offers a comprehensive view of the particles’ morphological and molecular characteristics.

conclusionThis triple-correlation strategy enables the identification of intact SARS-CoV-2 particles and their clear distinction from similarly sized hollow particles, viral fragments, and staining artifacts. The height range of confirmed SARS-CoV-2 particles under the applied conditions was determined to be 60–100 nm. The presented correlative imaging approach is broadly applicable to other RNA viruses, offering a versatile tool for high-specificity virus detection.

Indexed as

Microscopy, Atomic ForceRNA VirusesSARS-CoV-2HumansMicroscopy, FluorescenceRNA, ViralVirionRNA, ViralAtomic force microscopyRNA virusSARS-CoV-2

Identifiers

PMID41366486
PMCPMC12903297

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.