Evidence map›Paper›PMID 41365852›Full record

ArticleNature communications2025

A highly active Burkholderia polyketoacyl-CoA thiolase for production of triacetic acid lactone.

Zilong Wang, Seokjung Cheong, Jose Henrique Pereira, Weixi Hu, Yifan Guo, Andy DeGiovanni, Guangxu Lan, Jinho Kim, Robert W Haushalter, Taek Soon Lee and 2 more

Abstract read
In one paragraph

Article in Nature communications, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors.

Zilong Wang *Joint BioEnergy Institute, Emeryville, CA, USA.
Seokjung Cheong *Joint BioEnergy Institute, Emeryville, CA, USA.
Jose Henrique PereiraJoint BioEnergy Institute, Emeryville, CA, USA.
Weixi HuJoint BioEnergy Institute, Emeryville, CA, USA.
Yifan GuoJoint BioEnergy Institute, Emeryville, CA, USA.ORCID http://orcid.org/0009-0001-2966-7138
Andy DeGiovanniJoint BioEnergy Institute, Emeryville, CA, USA.
Guangxu LanJoint BioEnergy Institute, Emeryville, CA, USA.ORCID http://orcid.org/0000-0002-0415-5849
Jinho KimJoint BioEnergy Institute, Emeryville, CA, USA.
Robert W HaushalterJoint BioEnergy Institute, Emeryville, CA, USA.
Taek Soon LeeJoint BioEnergy Institute, Emeryville, CA, USA.ORCID http://orcid.org/0000-0002-0764-2626
Paul D AdamsJoint BioEnergy Institute, Emeryville, CA, USA.ORCID http://orcid.org/0000-0001-9333-8219
Jay D KeaslingJoint BioEnergy Institute, Emeryville, CA, USA. keasling@berkeley.edu.ORCID http://orcid.org/0000-0003-4170-6088

Funding

User Training and OutreachP30GM124169 · NIGMS · UNIVERSITY OF CALIF-LAWRENC BERKELEY LAB · PI Gregory L Hura · 2017 to 2026
$28.6M
DOE | Office of Energy Efficiency & Renewable Energy | Bioenergy Technologies Office (BETO) 1916-1597NIGMS NIH HHS P30 GM124169
6 · The paper itself

Abstract

Triacetic acid lactone (TAL) is a versatile platform chemical traditionally biosynthesized via decarboxylative Claisen condensation by 2-pyrone synthase. However, this route is limited by poor efficiency and dependence on malonyl-CoA. Here, we show that non-decarboxylative Claisen condensation by polyketoacyl-CoA thiolases offers a more efficient alternative. Through mining homologs of a previously reported enzyme from Cupriavidus necator, we identify five thiolases with TAL production activity. One candidate, BktBbr from Burkholderia sp. RF2-non_BP3, exhibits approximately 30-fold higher activity in vitro and supports 30-fold higher TAL titers in Escherichia coli compared to the original enzyme. Fed-batch fermentation achieves titers up to 2.8 g L⁻¹. Structural analysis of BktBbr co-crystallized with CoA esters guides rational engineering to further enhance performance. Our discovery of a highly active thiolase establishes an alternative enzymatic route to produce TAL efficiently, providing a scalable foundation for sustainable biomanufacturing.

Indexed as

Acetyl-CoA C-AcetyltransferaseBacterial ProteinsBurkholderiaLactonesPyronesEscherichia coliFermentationAcetyl-CoA C-AcetyltransferaseBacterial ProteinsLactonesPyronestriacetic acid lactone

Identifiers

PMID41365852
PMCPMC12689856

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.