ArticleProceedings of the National Academy of Sciences of the United States of America2025
Erratum issuedAbstract read
In one paragraph
Article in Proceedings of the National Academy of Sciences of the United States of America, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 3 papers.
0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
What it found
Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.
The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
The trial behind it
Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.
Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.
Who cites it
3 citing papers in PubMed.
- Ordered assembly of themBio · 2026Article
- Environmental regulation of virulence in Vibrio cholerae: integrating multi-omics, predictive models, and comparative insights across emerging Vibrio species.Gut pathogens · 2026Review
- Predator-prey dynamics of Vibrio cholerae on chitin suggest an alternative mode of biofilm formation in marine snow conditions.The ISME journal · 2026Article
Corrections and comments
- Erratum issued
Authors and funding
20 authors.
Anna PotapovaDepartment of Microbiology and Environmental Toxicology, University of California-Santa Cruz, Santa Cruz, CA 95064.ORCID 0000-0002-6855-8954
Rino OguchiDepartment of Microbiology and Environmental Toxicology, University of California-Santa Cruz, Santa Cruz, CA 95064.
Steffi JimmyCentre for Structural Systems Biology, Deutsches Elektronen-Synchrotron, Hamburg D-22607, Germany.ORCID 0000-0002-6309-4791
Christopher R EvansDepartment of Biological Sciences, Columbia University, New York, NY 10027.ORCID 0000-0001-9179-3875
Kaitlin D YarringtonDepartment of Microbiology and Immunology, Carver College of Medicine, University of Iowa, Iowa City, IA 52242.ORCID 0000-0002-5347-2760
James B WinansDepartment of Biological Sciences, Dartmouth, Hanover, NH 03755.ORCID 0009-0000-2205-290X
Sofia PiepoliDepartment of Microbiology and Environmental Toxicology, University of California-Santa Cruz, Santa Cruz, CA 95064.ORCID 0000-0002-3891-9464
Ethan A OlderDepartment of Chemistry and Biochemistry, University of California-Santa Cruz, Santa Cruz, CA 95064.ORCID 0000-0003-1281-4071
Olivia F SchakelDepartment of Biology, Indiana University, Bloomington, IN 47405-7005.ORCID 0009-0009-9585-1556
Miles T WetheringtonSchool of Physics, Georgia Institute of Technology, Atlanta, GA 30332.
William GarveyDepartment of Microbiology and Environmental Toxicology, University of California-Santa Cruz, Santa Cruz, CA 95064.
Kyle A FloydDepartment of Microbiology and Environmental Toxicology, University of California-Santa Cruz, Santa Cruz, CA 95064.ORCID 0000-0003-3261-7999
Evgeny VinogradovNational Research Council, Ottawa, ON K1A 0R6, Canada.
Peter J YunkerSchool of Physics, Georgia Institute of Technology, Atlanta, GA 30332.ORCID 0000-0001-8471-4171
Laura M SanchezDepartment of Chemistry and Biochemistry, University of California-Santa Cruz, Santa Cruz, CA 95064.ORCID 0000-0001-9223-7977
Carey D NadellDepartment of Biological Sciences, Dartmouth, Hanover, NH 03755.ORCID 0000-0003-1751-4895
Dominique H LimoliDepartment of Microbiology and Immunology, Carver College of Medicine, University of Iowa, Iowa City, IA 52242.
Lars E P DietrichDepartment of Biological Sciences, Columbia University, New York, NY 10027.ORCID 0000-0003-2049-1137
Holger SondermannCentre for Structural Systems Biology, Deutsches Elektronen-Synchrotron, Hamburg D-22607, Germany.ORCID 0000-0003-2211-6234
Fitnat H YildizDepartment of Microbiology and Environmental Toxicology, University of California-Santa Cruz, Santa Cruz, CA 95064.ORCID 0000-0002-6384-7167
Funding
Vibrio cholerae biofilms: structure, function, regulation and role in infectionR01AI114261 · NIAID · UNIVERSITY OF CALIFORNIA SANTA CRUZ · PI YILDIZ, HAVVA FITNAT · 2014 to 2024
$5.0MIntegration of redox-balancing mechanisms in Pseudomonas aeruginosa biofilmsR01AI103369 · NIAID · COLUMBIA UNIV NEW YORK MORNINGSIDE · PI DIETRICH, LARS · 2013 to 2022
$4.1MIRACDA at UCSC and CSUMBK12GM139185 · NIGMS · UNIVERSITY OF CALIFORNIA SANTA CRUZ · PI FORSBERG, CAMILLA, HINCK, LINDSAY E · 2020 to 2024
$4.1MDecoding interspecies signaling networks and the biogeography of polymicrobial infectionsR35GM142760 · NIGMS · UNIVERSITY OF IOWA · PI LIMOLI, DOMINIQUE · 2021 to 2025
$2.2MThe Biophysical Foundations of Bacterial Biofilm Growth and SurvivalR35GM138354 · NIGMS · GEORGIA INSTITUTE OF TECHNOLOGY · PI Peter Yunker · 2020 to 2026
$2.0MBacterial and Viral Predator-Prey Dynamics within Bacterial Biofilms at Cellular ResolutionR35GM151158 · NIGMS · DARTMOUTH COLLEGE · PI Carey Nadell · 2023 to 2026
$1.6MBSLII Stationed Zeiss 880 Confocal Microscope with AiryscanS10OD023528 · OD · UNIVERSITY OF CALIFORNIA SANTA CRUZ · PI YILDIZ, HAVVA FITNAT · 2017 to 2017
$456kCharacterizing Competition Between Virulent and Temperate Phages for Biofilm-Residing Host BacteriaF31AI183523 · NIAID · DARTMOUTH COLLEGE · PI WINANS, JAMES B · 2025 to 2025
$50kHHS | NIH | National Institute of Allergy and Infectious Diseases (NIAID) R01AI103369HHS | NIH | National Institute of Allergy and Infectious Diseases (NIAID) R01AI114261HHS | NIH | National Institute of General Medical Sciences (NIGMS) 1R35GM138354-01HHS | NIH | National Institute of General Medical Sciences (NIGMS) 1R35GM151158-01HHS | NIH | National Institute of General Medical Sciences (NIGMS) K12GM139185HHS | NIH | National Institute of General Medical Sciences (NIGMS) R35GM142760Human Frontier Science Program (HFSP) RGY0077/2020National Institute of Health S10 751 OD023528NIAID NIH HHS F31 AI183523NIAID NIH HHS R01 AI103369NIAID NIH HHS R01 AI114261NIGMS NIH HHS K12 GM139185NIGMS NIH HHS R35 GM138354NIGMS NIH HHS R35 GM142760NIGMS NIH HHS R35 GM151158NIH HHS S10 OD023528NSF | BIO | Division of Integrative Organismal Systems (IOS) IOS-2017879Simons Foundation (SF) 826672Stephenson Distinguished Visitor Programme, DESY in Hamburg, Germany N/A
Abstract
Biofilms are critical for the environmental persistence, survival, and infectivity of
Indexed as
Bacterial ProteinsBiofilmsGlutamic AcidVibrio choleraeCrystallography, X-RayPolysaccharides, BacterialProtein BindingBacterial ProteinsGlutamic AcidPolysaccharides, Bacterialbiofilm matrixTAXI/TRAP proteinVibrio cholerae
Identifiers
What OpenQuestion holds
Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390
Registered trials
None linked
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.