Evidence map›Paper›PMID 41361348›Full record

ArticleScientific reports2025

Transcriptome analysis of orbital tissue in thyroid eye disease uncovers key pathogenic mediators.

Wumei Hua, Xiaolan Ji, Jingqiao Chen, Ziyuan Jiang, Honglin Chen, Yuhui Cui, Minyan Li, Xingyu Lu, Xuefeng Wang, Ji Zhang

Abstract read
In one paragraph

Article in Scientific reports, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Review
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Wumei HuaDepartment of Ophthalmology, School of Basic Medical Sciences, The Second Affiliated Hospital of Soochow University, Suzhou Medical College of Soochow University, Suzhou, 215004, People's Republic of China.
Xiaolan JiDepartment of Ophthalmology, School of Basic Medical Sciences, The Second Affiliated Hospital of Soochow University, Suzhou Medical College of Soochow University, Suzhou, 215004, People's Republic of China.
Jingqiao ChenDepartment of Ophthalmology, School of Basic Medical Sciences, The Second Affiliated Hospital of Soochow University, Suzhou Medical College of Soochow University, Suzhou, 215004, People's Republic of China.
Ziyuan JiangDepartment of Ophthalmology, School of Basic Medical Sciences, The Second Affiliated Hospital of Soochow University, Suzhou Medical College of Soochow University, Suzhou, 215004, People's Republic of China.
Honglin ChenDepartment of Ophthalmology, School of Basic Medical Sciences, The Second Affiliated Hospital of Soochow University, Suzhou Medical College of Soochow University, Suzhou, 215004, People's Republic of China.
Yuhui CuiSuzhou Xiangcheng People's Hospital, 215131, Suzhou, People's Republic of China.
Minyan LiDepartment of Ophthalmology, School of Basic Medical Sciences, The Second Affiliated Hospital of Soochow University, Suzhou Medical College of Soochow University, Suzhou, 215004, People's Republic of China.
Xingyu LuSchool of Radiation Medicine and Protection, Suzhou Medical College of Soochow University, Suzhou, 215123, People's Republic of China.
Xuefeng WangDepartment of Ophthalmology, School of Basic Medical Sciences, The Second Affiliated Hospital of Soochow University, Suzhou Medical College of Soochow University, Suzhou, 215004, People's Republic of China. wangxuefeng@suda.edu.cn.
Ji ZhangDepartment of Ophthalmology, School of Basic Medical Sciences, The Second Affiliated Hospital of Soochow University, Suzhou Medical College of Soochow University, Suzhou, 215004, People's Republic of China. jizhang@suda.edu.cn.

Funding

Jiangsu Provincial Natural Science Foundation Project BK20231201the Priority Academic Program Development of Jiangsu Higher Education Institutions GZK1202305the Project of State Key Laboratory of Radiation Medicine and Protection, Soochow University GZK1202203
6 · The paper itself

Abstract

This study employed RNA sequencing and bioinformatics to identify differentially expressed genes (DEGs) and signaling pathways in thyroid eye disease (TED). Orbital adipose tissues from TED patients and normal controls were sequenced, followed by DEG screening. Primary cultured orbital fibroblasts were used to validate highly expressed DEGs via qRT-PCR. We observed significant upregulation of genes involved in adipogenesis (e.g., ACSL5), muscle fiber formation/contraction (e.g., TNNT1), and nerve injury (e.g., NEFM) in TED. qRT-PCR confirmed elevated expression of IL-6, COL1A1, PPARγ, NEFM, ACSL5, and TNNT1 in TED fibroblasts. Enrichment analysis revealed 20 significantly altered biological processes, including triglyceride biosynthesis and muscle filament sliding. Upregulated DEGs were primarily associated with the PPAR, AMPK, and adipocytokine signaling pathways. Our findings identify ACSL5, TNNT1, and NEFM as key mediators in TED pathogenesis, contributing to adipogenesis, muscle thickening, and nerve injury, respectively. The PPARγ-ACSL5 pathway is implicated in orbital adipogenesis, suggesting potential therapeutic targets for TED.

Indexed as

Gene Expression ProfilingGraves OphthalmopathyOrbitTranscriptomeAdipogenesisAdipose TissueAdultCoenzyme A LigasesComputational BiologyFemaleFibroblastsHumansMaleMiddle AgedPPAR gammaSignal TransductionCoenzyme A LigasesPPAR gamma

Identifiers

PMID41361348
PMCPMC12783674

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.