Evidence map›Paper›PMID 41361253›Full record

ArticleBMC plant biology2025

Transcriptome analysis reveals plant hormone signal transduction mechanisms underlying freezing stress responses in Cycas panzhihuaensis.

Jiao Yu, Yihang Zhou, Chaotian Xu, Fang Wang, Yanling Zheng

Abstract read
In one paragraph

Article in BMC plant biology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Jiao Yu *Key Laboratory for Forest Resources Conservation and Utilization in the Southwest Mountains of China, Ministry of Education, Southwest Forestry University, Kunming, Yunnan, 650224, China.
Yihang Zhou *Key Laboratory for Forest Resources Conservation and Utilization in the Southwest Mountains of China, Ministry of Education, Southwest Forestry University, Kunming, Yunnan, 650224, China.
Chaotian Xu *Key Laboratory for Forest Resources Conservation and Utilization in the Southwest Mountains of China, Ministry of Education, Southwest Forestry University, Kunming, Yunnan, 650224, China.
Fang WangKey Laboratory for Forest Resources Conservation and Utilization in the Southwest Mountains of China, Ministry of Education, Southwest Forestry University, Kunming, Yunnan, 650224, China.
Yanling ZhengKey Laboratory for Forest Resources Conservation and Utilization in the Southwest Mountains of China, Ministry of Education, Southwest Forestry University, Kunming, Yunnan, 650224, China. flashingzyl@163.com.

Funding

National Natural Science Foundation of China 32460102
6 · The paper itself

Abstract

backgroundGlobal warming intensifies climate extremes, with rising temperatures and more frequent heatwaves. This situation may make it more difficult for species in high-temperature regions, such as the Cycas panzhihuaensis. Introduction and domestication are vital for conservation, but low temperatures limit the spread of tropical and subtropical plants to higher latitudes and altitudes. Phytohormones mediate cold adaptation through complex signaling networks that regulate physiological and molecular responses. However, the hormonal regulation and molecular mechanisms underlying freezing tolerance in C. panzhihuaensis remain poorly understood.

resultsThis study used C. panzhihuaensis as the research subject. We exposed the plant to freezing stress and measures leaf hormone levels under CK (control group), F1(-5 °C for 1.5 h), and F2(-5 °C for 6 h). Additionally, we conducted transcriptomic analysis to explore gene expression differences in plant hormone signal transduction pathways. The findings indicated that with prolonged freezing treatment, the contents of cis-12-oxophytodienoic acid (cis-OPDA), gibberellin A4 (GA4), and salicylic acid (SA) initially increased significantly but subsequently decreased markedly. After F2 treatment, abscisic acid (ABA) levels significantly decreased, whereas castasterone (CS), 1-aminocyclopropanecarboxylic acid (ACC), and cytokinin (CTK) exhibited notable increases. Through transcriptomic analysis, a total of 4,036 differentially expressed genes (DEGs) associated with freezing stress were identified. In the plant hormone signal transduction pathway, 69 DEGs were enriched as determined by KEGG enrichment analysis. Further analysis indicated that the altered gene expression in this pathway was closely associated with hormonal level variations and the freezing resistance of C. panzhihuaensis. This research offers essential understanding of the molecular processes behind the freezing resistance of C. panzhihuaensis and provides theoretical advice for its introduction and cultivation.

conclusionsThis study revealed that C. panzhihuaensis adapted to freezing stress through dynamic hormonal regulation and transcriptional reprogramming. Key phytohormones (cis-OPDA, GA4, SA, ABA, ACC, CS, and CTK) exhibited stage-specific accumulation patterns, and the plant hormone signal transduction pathway may be involved in regulating the cold resistance mechanism in C. panzhihuaensis. These findings provide crucial insights into cold resistance mechanisms of C. panzhihuaensis and establish a preliminary theoretical foundation for introducing this species to higher latitudes.

Indexed as

Plant Growth RegulatorsSignal TransductionFreezingGene Expression ProfilingGene Expression Regulation, PlantStress, PhysiologicalTranscriptomePlant Growth RegulatorsCycas panzhihuaensisFreezing stressPlant hormone signal transductionTranscriptome

Identifiers

PMID41361253
PMCPMC12797473

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.