Evidence map›Paper›PMID 41359627›Full record

ArticlePloS one2025

Optical tissue clearing and 3D imaging of intact primate testicular tissue: a novel technology development.

Pauline Wanjiku Kibui, Sarah Weischer, Nicola von Ostau, Jochen Hess, Nils Kirschnick, Thomas Zobel, Stefan Schlatt

Abstract read
In one paragraph

Article in PloS one, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Pauline Wanjiku KibuiCentre of Reproductive Medicine and Andrology, University of Münster, Münster, North Rhine-Westphalia, Germany.ORCID https://orcid.org/0000-0003-0964-7604
Sarah WeischerMünster Imaging Network, Cells in Motion Interfaculty Centre, University of Münster, Münster, North Rhine-Westphalia, Germany.ORCID https://orcid.org/0000-0001-7292-8308
Nicola von OstauUniversity Clinic Essen, Clinic and Policlinic for Urology, Children Urology and Urooncology, Essen, Germany.
Jochen HessUniversity Clinic Essen, Clinic and Policlinic for Urology, Children Urology and Urooncology, Essen, Germany.ORCID https://orcid.org/0000-0002-9902-5368
Nils KirschnickBioOpticService Unit, Max Planck Institute for Molecular Biomedicine, Münster, North Rhine-Westphalia, Germany.
Thomas ZobelMünster Imaging Network, Cells in Motion Interfaculty Centre, University of Münster, Münster, North Rhine-Westphalia, Germany.
Stefan SchlattCentre of Reproductive Medicine and Andrology, University of Münster, Münster, North Rhine-Westphalia, Germany.ORCID https://orcid.org/0000-0002-7571-5313

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Classical histology struggles to preserve three-dimensional spatial context, prompting the emergence of optical tissue clearing techniques that enable imaging of intact specimens at cellular or subcellular resolution. These techniques have revolutionised fields like cell biology, developmental biology, and neuroscience. However, their application in reproductive biology remains unexplored - particularly in studying the complexities of testicular development. We developed a novel, efficient and affordable toolbox for studying intact testicular tissues, PT-CLEAR3D, that stands for primate testis - whole mount staining, tissue clearing and three-dimensional imaging. Intact testicular tissues from humans (transgender model), common marmosets and macaques underwent antibody labelling, clearing with organic solvents, and three-dimensional imaging using light sheet fluorescence microscopy. Marker specificity was confirmed by immunofluorescence staining of 3 and 25 µm testicular sections, followed by imaging with confocal microscopy. The testicular structure was evaluated using several markers: spermatogonia (melanoma-associated antigen 4), least differentiated spermatogonia (Piwi-like protein 4), Sertoli cells (vimentin and SRY-Box transcription Factor 9), peritubular myoid cells and vasculature (alpha-smooth muscle actin), and NucSpot as a nuclear dye. PT-CLEAR3D efficiently achieved optical transparency while a commercial kit that was run in parallel was inefficient. This study presents a pioneering three-dimensional visualization of intact testicular samples of up to 50 mm3 in size and imaging depth of up to 4.5 mm across three primate species. Remarkably, PT-CLEAR3D revealed critical details at both tissue and cellular levels such as the spatial distribution of germ and somatic cells, cellular bridges, and vasculature. Furthermore, PT-CLEAR3D enabled three-dimensional reconstructions that effectively reduces confirmation bias enhancing our observation of spermatogonial clones organized as single cells, pairs, and quartets. Importantly, it adeptly identified testicular pathology and the persistence of germ cell clones in select tubules within the transgender testis following hormonal suppression of spermatogenesis. This technological development offers a versatile toolbox with benefits such as applicability across multiple species, fluorophore multiplexing, compatibility with different fixatives and deep tissue volumetric imaging with cellular resolution. Overall, PT-CLEAR3D establishes a foundation for spatial evaluation of testicular development, presenting substantial potential for advancing our understanding of the intricate kinetics of spermatogenesis in health and disease.

Indexed as

Imaging, Three-DimensionalTestisAnimalsCallithrixHumansMacacaMaleMicroscopy, FluorescenceSpermatogonia

Identifiers

PMID41359627
PMCPMC12685185

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.