Evidence map›Paper›PMID 41358420›Full record

ArticleJournal of medical virology2025

Viability of Self-Taken Vaginal Swab Samples for RNA-Based Biomarker Analysis in Cervical Disease.

Harry Scott, Andrew Stevenson, Daniel Mair, William M Rooney, Hana McMahon, Laila Sara Arroyo Mühr, Kate Cuschieri, Sheila V Graham

Abstract read
In one paragraph

Article in Journal of medical virology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Harry ScottMRC-University of Glasgow Centre for Virus Research, School of Infection and Immunity, College of Medical Veterinary and Life Sciences, University of Glasgow, Garscube Estate, Glasgow, UK.
Andrew StevensonMRC-University of Glasgow Centre for Virus Research, School of Infection and Immunity, College of Medical Veterinary and Life Sciences, University of Glasgow, Garscube Estate, Glasgow, UK.
Daniel MairMRC-University of Glasgow Centre for Virus Research, School of Infection and Immunity, College of Medical Veterinary and Life Sciences, University of Glasgow, Garscube Estate, Glasgow, UK.ORCID 0000-0001-7169-9080
William M RooneyMRC-University of Glasgow Centre for Virus Research, School of Infection and Immunity, College of Medical Veterinary and Life Sciences, University of Glasgow, Garscube Estate, Glasgow, UK.
Hana McMahonInstitute for Regeneration and Repair, University of Edinburgh, Edinburgh, UK.
Laila Sara Arroyo MührCenter for Cervical Cancer Elimination, Department of Clinical Science, Intervention and Technology, Karolinska Institutet, F56 Karolinska University Hospital, Stockholm, Sweden.ORCID 0000-0003-2498-5206
Kate CuschieriScottish HPV Reference Laboratory, Royal Infirmary of Edinburgh, 51 Little France Crescent NHS Lothian, Edinburgh, UK.
Sheila V GrahamMRC-University of Glasgow Centre for Virus Research, School of Infection and Immunity, College of Medical Veterinary and Life Sciences, University of Glasgow, Garscube Estate, Glasgow, UK.ORCID 0000-0002-7140-8279

Funding

This study was supported by the Chief Scientist Office, Scotland, grant number TCS/22/24 and MRC-University of Glasgow quinquennial core grant number MC_UU_00034/5.
6 · The paper itself

Abstract

High risk human papillomaviruses (hrHPVs) cause most cervical cancers. Cervical screening programmes aim to identify precancerous disease using detection of hrHPV nucleic acid using clinician-taken liquid-based cytology (LBC) samples, or increasingly, self-taken samples (STSs). However, STSs are incompatible with traditional cytology triage. Therefore, development of novel triage tests is essential. Quantification of cellular and viral mRNA biomarkers is one option, but little is known about mRNA quality in STSs. We extracted RNA from two sets of STSs (reflecting separate sampling devices) from the Scottish HPV Archive (SHA) and the Swedish Cervical Cytology Biobank (SCCB). We investigated whether the ACTB, GAPDH and p16 RNAs could be amplified by reverse transcription quantitative PCR (RT-qPCR). RNA was degraded in both sets of samples, but samples from the Scottish HPV Archive were generally suitable for RT-qPCR analysis, while samples from the SCCB were mostly unsuitable. Genomic DNA contamination was detected in 11.6% of samples. The quantity and quality of RNA derived from STSs was unaffected by storage of the original sample at -70°C for a period of 1 year. These data suggest that feasibility of utilising STSs for mRNA expression work is device-dependent and that optimisation of collection and storage systems is warranted.

Indexed as

Papillomavirus InfectionsRNA, ViralSpecimen HandlingUterine Cervical NeoplasmsVaginaBiomarkersFemaleHumansPapillomaviridaeReal-Time Polymerase Chain ReactionRNA, MessengerRNA StabilityScotlandSwedenBiomarkersRNA, MessengerRNA, Viralcervical screeninghuman papillomavirusRNA quality biomarkersself taken samples

Identifiers

PMID41358420
PMCPMC12683698

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.