Evidence map›Paper›PMID 41357186›Full record

ArticleFrontiers in immunology2025

Yang-deficiency constitution drives poor outcomes in clear cell renal cell carcinoma by modulating the tumour immune microenvironment.

Boon Seng Kho, Zongyuan Zhou, Rui Liu, Yihang Sui, Yingnan Zhang, Jiaqi Yao, Huanhuan Lu, Guowei Zhou, Bo Zhang, Yinyin Wang

Abstract read
In one paragraph

Article in Frontiers in immunology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Boon Seng Kho *Department of Traditional Chinese Medicines (TCMs) Pharmaceuticals, School of Traditional Chinese Pharmacy, China Pharmaceutical University, Nanjing, China.
Zongyuan Zhou *Sichuan Industrial Institute of Antibiotics, School of Pharmacy, Chengdu University, Chengdu, China.
Rui LiuDepartment of Traditional Chinese Medicines (TCMs) Pharmaceuticals, School of Traditional Chinese Pharmacy, China Pharmaceutical University, Nanjing, China.
Yihang SuiDepartment of Traditional Chinese Medicines (TCMs) Pharmaceuticals, School of Traditional Chinese Pharmacy, China Pharmaceutical University, Nanjing, China.
Yingnan ZhangDepartment of Traditional Chinese Medicines (TCMs) Pharmaceuticals, School of Traditional Chinese Pharmacy, China Pharmaceutical University, Nanjing, China.
Jiaqi YaoDepartment of Traditional Chinese Medicines (TCMs) Pharmaceuticals, School of Traditional Chinese Pharmacy, China Pharmaceutical University, Nanjing, China.
Huanhuan LuDepartment of Traditional Chinese Medicines (TCMs) Pharmaceuticals, School of Traditional Chinese Pharmacy, China Pharmaceutical University, Nanjing, China.
Guowei ZhouDepartment of General Surgery, Affiliated Hospital of Nanjing University of Chinese Medicine, Nanjing, China.
Bo ZhangSichuan Industrial Institute of Antibiotics, School of Pharmacy, Chengdu University, Chengdu, China.
Yinyin WangDepartment of Traditional Chinese Medicines (TCMs) Pharmaceuticals, School of Traditional Chinese Pharmacy, China Pharmaceutical University, Nanjing, China.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Background: Clear cell renal cell carcinoma (ccRCC) is the most common subtype of kidney cancer, often diagnosed at advanced stages due to a lack of reliable early biomarkers. Recent studies suggest that the traditional Chinese medicine (TCM) body constitution, particularly the Yang-Deficiency Constitution (YDC), may influence tumour development by altering the immune microenvironment. However, the mechanistic connection between YDC and ccRCC prognosis remains largely unexplored. Objective: This study aims to elucidate the impact of YDC on the immune landscape and clinical outcomes of ccRCC and to identify novel prognostic biomarkers and potential herbal therapeutic agents guided by YDC characteristics. Methods: We integrated bulk transcriptomic data from 12 YDC-classified individuals and 530 ccRCC patients, alongside single-cell RNA-seq profiles from one PBMC and two ccRCC tumour samples. Through differential expression analysis, WGCNA, and machine learning-based survival modelling, we identified YDC-related biomarkers and assessed their immunological relevance using ESTIMATE, CIBERSORT, and CellChat. A gene expression-based scoring framework (GSVA) was developed to systematically prioritize 622 herbal ingredient perturbations for their potential survival benefits. Key ingredients were further validated through molecular docking and experimental assays. Results: Patients with YDC-associated ccRCC exhibited poorer survival. Nine intersecting genes were screened and used to construct a prognostic model, whereby seven key biomarkers-MXD3, PLCB2, CCDC88B, DEF6, IFNG, TBC1D10C, and PLEKHN1-were significantly influenced the prognosis of renal cancer. These genes were found to modulate immune cell populations, particularly CD8 Conclusion: This study highlights the crucial role of YDC in shaping the immune microenvironment and influencing survival in ccRCC. By integrating constitution-based stratification, immune profiling, and herbal medicine screening, we offer a unique framework for biomarker discovery and propose baicalein as a potential YDC-targeted adjuvant therapy.

Indexed as

Carcinoma, Renal CellKidney NeoplasmsTumor MicroenvironmentBiomarkers, TumorDrugs, Chinese HerbalFemaleGene Expression ProfilingGene Expression Regulation, NeoplasticHumansMaleMedicine, Chinese TraditionalMiddle AgedPrognosisTranscriptomeBiomarkers, TumorDrugs, Chinese Herbalclear cell real cell carcinoma (ccRCC)immuneinfiltrationpre-diagnosis biomarkerstherapeutic interventiontumor immune microenvironmentYang-deficiencyconstitution (YDC)

Identifiers

PMID41357186
PMCPMC12675363

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.