Evidence map›Paper›PMID 41353448›Full record

ArticleNature communications2025

Seasonal enhancement of the viral shunt catalyzes a subsurface oxygen maximum in the Sargasso Sea.

Naomi E Gilbert, Daniel Muratore, Camelia Shopen Gochev, Gary R LeCleir, Shelby M Cagle, Helena L Pound, Christine L Sun, Alfonso Carrillo, Kimberley S Ndlovu, Ilia Maidanik and 8 more

Abstract read
In one paragraph

Article in Nature communications, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

18 authors.

Naomi E Gilbert *Department of Microbiology, The University of Tennessee, Knoxville, TN, USA.
Daniel Muratore *School of Biological Sciences, Georgia Institute of Technology, Atlanta, GA, USA.
Camelia Shopen GochevFaculty of Biology, Technion-Israel Institute of Technology, Haifa, Israel.ORCID http://orcid.org/0009-0000-9985-8338
Gary R LeCleirDepartment of Microbiology, The University of Tennessee, Knoxville, TN, USA.
Shelby M CagleDepartment of Microbiology, The University of Tennessee, Knoxville, TN, USA.ORCID http://orcid.org/0000-0003-1552-378X
Helena L PoundDepartment of Microbiology, The University of Tennessee, Knoxville, TN, USA.
Christine L SunDepartment of Microbiology, The Ohio State University, Columbus, OH, USA.
Alfonso CarrilloDepartment of Microbiology, The Ohio State University, Columbus, OH, USA.ORCID http://orcid.org/0009-0006-7224-7186
Kimberley S NdlovuDepartment of Microbiology, The Ohio State University, Columbus, OH, USA.ORCID http://orcid.org/0000-0001-6188-6261
Ilia MaidanikFaculty of Biology, Technion-Israel Institute of Technology, Haifa, Israel.
Ashley R CoenenSchool of Physics, Georgia Institute of Technology, Atlanta, GA, USA.
Lauren ChittickDepartment of Microbiology, The Ohio State University, Columbus, OH, USA.ORCID http://orcid.org/0009-0002-7200-7028
Jennifer M DeBruynBiosystems Engineering and Soil Science, The University of Tennessee, Knoxville, TN, USA.ORCID http://orcid.org/0000-0002-2993-4144
Alison BuchanDepartment of Microbiology, The University of Tennessee, Knoxville, TN, USA.
Debbie LindellFaculty of Biology, Technion-Israel Institute of Technology, Haifa, Israel.ORCID http://orcid.org/0000-0003-0612-4517
Matthew B SullivanDepartment of Microbiology, The Ohio State University, Columbus, OH, USA.ORCID http://orcid.org/0000-0001-8398-8234
Joshua S WeitzDepartment of Biology, University of Maryland, College Park, MD, USA. jsweitz@umd.edu.ORCID http://orcid.org/0000-0002-3433-8312
Steven W WilhelmDepartment of Microbiology, The University of Tennessee, Knoxville, TN, USA. wilhelm@utk.edu.ORCID http://orcid.org/0000-0001-6283-8077

Funding

National Science Foundation (NSF) 182964National Science Foundation (NSF) OCE-1829636Simons Foundation 721231Simons Foundation 735077
6 · The paper itself

Abstract

Subsurface oxygen maxima (SOMs) occur directly beneath the mixed layer of stratified water columns across oligotrophic open ocean basins and have been associated with physical transport processes and localized increases in phytoplankton net primary productivity (NPP). We explore the hypothesis that viral lysis (i.e., the 'viral shunt') increases nutrient recycling and enhances NPP, supporting SOM formation in stratified water columns, focusing on a recurring SOM at the Bermuda Atlantic Time Series (BATS) in the Sargasso Sea. Reanalysis of historical BATS data showed enhanced Prochlorococcus and virus-like particle abundances associated with SOMs. Instances of high rates of primary and secondary production observed with oxygen supersaturation further implicate a biological mechanism for SOM formation. Leveraging metatranscriptomes, metaviromes, and polony-based data collected during a Lagrangian cruise (October 2019), we link the viral shunt to SOMs, including evidence of elevated cyanophage abundance and infection of Prochlorococcus, and transcriptomic evidence of increased organic matter uptake (i.e., catabolic activity) by copiotrophic bacteria. Cruise data also showed Prochlorococcus nitrogen metabolism transcripts consistent with increased responsiveness to bacterial remineralization. These findings illustrate the biogeochemical impacts of enhanced viral lysis in marine systems, including the potential role of the viral shunt in facilitating SOM formation in the oligotrophic oceans.

Indexed as

OxygenSeasonsSeawaterAtlantic OceanBacteriophagesOceans and SeasPhytoplanktonProchlorococcusOxygen

Identifiers

PMID41353448
PMCPMC12796325

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.