Evidence map›Paper›PMID 41353218›Full record

ArticleScientific reports2025

Transcriptomics reveals the mechanism of branching production in response to GR24 in A. gallica 541.

Liu Liu, Bing Li, Shoujian Li, Youyan Liu, Lingfeng Zhou, Shunxing Guo

Abstract read
In one paragraph

Article in Scientific reports, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Biology · 2026
    Review
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Liu LiuInstitute of Medicinal Plant Development, Chinese Academy of Medical Sciences & Peking Union Medical College, Beijing, 100193, China.
Bing LiInstitute of Medicinal Plant Development, Chinese Academy of Medical Sciences & Peking Union Medical College, Beijing, 100193, China.
Shoujian LiInstitute of Medicinal Plant Development, Chinese Academy of Medical Sciences & Peking Union Medical College, Beijing, 100193, China.
Youyan LiuInstitute of Medicinal Plant Development, Chinese Academy of Medical Sciences & Peking Union Medical College, Beijing, 100193, China.
Lingfeng ZhouInstitute of Medicinal Plant Development, Chinese Academy of Medical Sciences & Peking Union Medical College, Beijing, 100193, China.
Shunxing GuoInstitute of Medicinal Plant Development, Chinese Academy of Medical Sciences & Peking Union Medical College, Beijing, 100193, China. sxguo1986@163.com.

Funding

CAMS Innovation Fund for Medical Sciences 2021-I2M-1-031, 2022-I2M-2-001Institute of Medicinal Plant Development 3332023052
6 · The paper itself

Abstract

Rhizomorphs are specialized structures formed by the intertwining of mycelia in Armillaria and certain other basidiomycete fungi. The growth and branching of rhizomorphs are essential for nutrient acquisition, host colonization, and environmental adaptation in fungi. Strigolactones (SLs), a class of plant-derived signaling molecules, are well known for their role in promoting hyphal germination and branching in arbuscular mycorrhizal (AM) fungi. Studies suggest that GR24, an SL analogue, may also influence the behavior of other fungi, including Armillaria, promoting the formation of highly specialized rhizomorphs for nutrient acquisition and host colonization. However, the underlying mechanism remains unclear. In this study, we found that rhizomorph branching in GR24-treated A. gallica 541 was significantly greater than in the blank control group (CK). To investigate the response mechanism, we conducted RNA sequencing to examine transcriptomic changes in A. gallica 541 following exogenous GR24 treatment. Differentially expressed gene (DEG) analysis comparing the treated and CK groups revealed 983 differentially expressed genes, including 670 upregulated and 313 downregulated genes. These DEGs were associated with cytochrome P450-related processes, GA synthesis, diterpenoid biosynthesis, NAD(P)-binding proteins, and pentose and glucuronate interconversions. The findings suggest that increased rhizomorph branching is linked to the upregulation of growth-related genes and enhanced carbon metabolism. This study offers new insights into the molecular basis of rhizomorph branching in response to GR24 in A. gallica 541 and highlights the potential role of GR24 in fungal development.

Indexed as

ArmillariaHeterocyclic Compounds, 3-RingLactonesTranscriptomeGene Expression ProfilingGene Expression Regulation, FungalMycorrhizaeGR24 strigolactoneHeterocyclic Compounds, 3-RingLactonesArmillariaGR24Rhizomorph branching

Identifiers

PMID41353218
PMCPMC12690144

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.