Evidence map›Paper›PMID 41353149›Full record

ArticleBMC biology2025

Systems genetics of lifespan and senescence in Drosophila melanogaster.

Maryam Nasiri Aghdam, Desireé Unselt, Maria E Adonay, Tatiana V Morozova, Mary Anna Carbone, Gunjan H Arya, Lavanya Turlapati, Vijay Shankar, Robert R H Anholt, Trudy F C Mackay

Abstract read
In one paragraph

Article in BMC biology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Sex-Related Effect of Chronic Doses of Warfarin and Menadione onInternational journal of molecular sciences · 2026
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Maryam Nasiri AghdamInstitute for Human Genetics, Clemson University, Greenwood, SC, USA.
Desireé UnseltProgram in Genetics, W. M. Keck Center for Behavioral Biology and Department of Biological Sciences, North Carolina State University, Raleigh, NC, 27695, USA.
Maria E AdonayInstitute for Human Genetics, Clemson University, Greenwood, SC, USA.
Tatiana V MorozovaProgram in Genetics, W. M. Keck Center for Behavioral Biology and Department of Biological Sciences, North Carolina State University, Raleigh, NC, 27695, USA.
Mary Anna CarboneProgram in Genetics, W. M. Keck Center for Behavioral Biology and Department of Biological Sciences, North Carolina State University, Raleigh, NC, 27695, USA.
Gunjan H AryaProgram in Genetics, W. M. Keck Center for Behavioral Biology and Department of Biological Sciences, North Carolina State University, Raleigh, NC, 27695, USA.
Lavanya TurlapatiProgram in Genetics, W. M. Keck Center for Behavioral Biology and Department of Biological Sciences, North Carolina State University, Raleigh, NC, 27695, USA.
Vijay ShankarInstitute for Human Genetics, Clemson University, Greenwood, SC, USA.
Robert R H AnholtInstitute for Human Genetics, Clemson University, Greenwood, SC, USA.
Trudy F C MackayInstitute for Human Genetics, Clemson University, Greenwood, SC, USA. tmackay@clemson.edu.

Funding

Statistical Methods for Gene Regulatory Analysis From Single Cell Genomics DataP20GM139769 · NIGMS · CLEMSON UNIVERSITY · PI KONKEL, MIRIAM KRISTINE · 2021 to 2025
$10.8M
Genetic Basis of Lifespan and Healthspan Extension by ACE Inhibition in DrosophilaR01AG073181 · NIA · CLEMSON UNIVERSITY · PI Robert R. H Anholt, MARIA DE LUCA · 2022 to 2026
$2.4M
Systems Genetics of Drosophila Life SpanR01AG043490 · NIA · NORTH CAROLINA STATE UNIVERSITY RALEIGH · PI ANHOLT, ROBERT R. H, CARBONE, MARY ANNA · 2013 to 2017
$1.9M
Genetic Architecture of Drosophila LifespanF31AG053011 · NIA · NORTH CAROLINA STATE UNIVERSITY RALEIGH · PI UNSELT, DESIREE MICHELLE BREANNA · 2016 to 2018
$96k
NIA NIH HHS F31 AG053011NIA NIH HHS R01 AG043490NIA NIH HHS R01 AG073181NIGMS NIH HHS P20 GM139769NIH HHS F31 AG053011NIH HHS R01 AG043490
6 · The paper itself

Abstract

backgroundAs populations age, the number of people with age-related chronic diseases increases, causing significant social, economic and health problems. Natural variation in lifespan depends on multiple interacting genes and environmental exposures. Its short generation time and many resources make Drosophila melanogaster an advantageous model to uncover the genetic architecture that underlies variation in lifespan.

resultsWe performed whole genome sequencing on young and old flies, sexes separately, in an outbred advanced intercross population (AIP) derived from inbred, sequenced lines from the Drosophila Genetic Reference Panel (DGRP). We identified mostly sex-specific variants (extreme Quantitative Trait Loci; xQTLs) at 1,107 genes associated with increased lifespan. We used the same AIP for RNA sequencing of heads, bodies and reproductive tissues for males and females weekly to 10 weeks of age. We identified 2,613 genes with age-related changes, of which 186 had xQTLs. Over half of the significant effects of gene expression with age included sex- and/or tissue-specific context-dependent effects, many of which were antagonistic, indicating complex trade-offs in gene regulation in the context of lifespan. We mapped genes whose expression changes with age onto known gene-gene and protein-protein interactions to construct interaction networks anchored by xQTLs. These networks were enriched for evolutionarily conserved mitochondrial, metabolic, neuronal, immune and developmental genes. Human orthologs of Drosophila genes associated with senescence and lifespan were prevalent indicating the translational potential of results from Drosophila to human populations.

conclusionsNatural genetic variation in Drosophila identifies sex- and/or tissue-specific genetic variation and networks enriched for evolutionarily conserved genes.

Indexed as

AgingDrosophila melanogasterLongevityAnimalsFemaleMaleQuantitative Trait LociAgingContext-specific effectsDrosophila Genetic Reference Panel (DGRP)Interaction networksTranscriptional senescenceXQTLs

Identifiers

PMID41353149
PMCPMC12797436

What OpenQuestion holds

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LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.