Evidence map›Paper›PMID 41351062›Full record

ArticleClinical epigenetics2025

DNA methylation predicts lung function and pulmonary exacerbation in sputum samples from patients with cystic fibrosis.

Jorg Tost, Davide Caimmi, Manuela Pastore, Christelle Reynes, Florence Busato, Fanny Pineau, Mireille Claustres, Isabelle Vachier, Raphaël Chiron, Albertina De Sario

Registry-linked trialAbstract read
In one paragraph

Article in Clinical epigenetics, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. It is linked to trial NCT02976714 (Identification of Predictive Epigenetic Biomarkers of Lung Disease Severity in Cystic Fibrosis), which is not on this map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

NCT02976714 nacompletednot on this map

Identification of Predictive Epigenetic Biomarkers of Lung Disease Severity in Cystic Fibrosis

TypeinterventionalSponsorUniversity Hospital, MontpellierRan2016 to 2021Enrolled50ConditionsCystic FibrosisArmsspontaneous sputum
3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Epigenetic regulation and chromatin organization in cystic fibrosis airways.Journal of cystic fibrosis : official journal of the European Cystic Fibrosis Society · 2026
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Jorg TostLaboratory for Epigenetics & Environment, Centre National de Recherche en Génomique Humaine, CEA - Institut de Biologie François Jacob, Evry, France.
Davide CaimmiCRCM- CHRU, Montpellier, France.
Manuela PastoreCNRS, INSERM, Univ Montpellier, Biocampus, Montpellier, France.
Christelle ReynesCNRS, INSERM, Univ Montpellier, Biocampus, Montpellier, France.
Florence BusatoLaboratory for Epigenetics & Environment, Centre National de Recherche en Génomique Humaine, CEA - Institut de Biologie François Jacob, Evry, France.
Fanny PineauUniv Montpellier, Montpellier, France.
Mireille ClaustresUniv Montpellier, Montpellier, France.
Isabelle VachierDepartment of Respiratory Diseases and Addictology, CHRU Montpellier, Montpellier, France.
Raphaël ChironCRCM- CHRU, Montpellier, France.
Albertina De SarioPHYMEDEXP, Univ Montpellier, INSERM U1046, CNRS 9214, Montpellier, France. albertina.de-sario@inserm.fr.

Funding

Association Vaincre la Mucoviscidose RC20190502423Centre Hospitalier Régional Universitaire de Montpellier AOI 9745Université de Montpellier MUSE Key Initiative 2022
6 · The paper itself

Abstract

backgroundLung disease is variable among patients with cystic fibrosis (CF) and depends on genetic and environmental factors. To better understand the molecular determinants of lung disease variability, we carried out an epigenome-wide association study (EWAS) in sputum samples from patients with CF.

methodsWe profiled 64 sputum samples using Human Methylation EPIC BeadChips and assessed the correlation between DNA methylation levels and four clinical traits: lung function (FEV1

resultsIn the EWAS, we identified two differentially methylated CpG sites (cg11047325/SOCS3, p = 4 × 10

conclusionsWe provide the first longitudinal assessment of genome-wide DNA methylation in a cohort of patient with CF and identify CpG sites that predict clinical traits of key importance for lung disease. The associated genes play a critical role in inflammation or pancreatic endocrine activity. Overall, our results underscore the emerging role of DNA methylation as a key modulator of disease severity in CF.

Indexed as

Cystic FibrosisDNA MethylationSputumAdolescentAdultCohort StudiesCpG IslandsFemaleGenome-Wide Association StudyHumansLungMaleRespiratory Function TestsYoung AdultChronic obstructive pulmonary diseaseCystic fibrosisDiabetesDNA methylationEWASLung functionPulmonary exacerbationSputum

Identifiers

PMID41351062
PMCPMC12797401

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Registered trials

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.